Sideroxydans lithotrophicus: Slit_1182
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Entry
Slit_1182 CDS
T01196
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
Organism
slt
Sideroxydans lithotrophicus
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
PAS_9
PAS
GAF
PAS_8
PAS_3
PAS_4
PAS_13
Motif
Other DBs
NCBI-ProteinID:
ADE11420
UniProt:
D5CR34
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Position
complement(1168804..1171542)
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AA seq
912 aa
AA seq
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MNPTIRLQTYPWTSLFILLVVLGAISAVAIQSKFDDDLKFAHTSATQQLQLISTVISSEL
NHGNYQNIGPLFDHWAKADASIVELQLVSANGFKIAEYLRFSPDRHILELDEPISYSYRE
EATARIRVSLEPVYRRQARFIAQFAGIFLAFSILAALLLYFALQSKKESSRARRITRLYS
ALSEINQAIVRMEQEEQLFPLVCRCAVKFGGMNMAWVAQVDKESKLLLPAASYGAGQDYL
DGIVISPLADVPEGRGPVGVAFRENHPVIINDSSNDPDFAPWQNRASEQGWHSIAAFPIP
RGGRPFAVLSVYHQHIDAFDGESIALLDEMSRDISFSLDNFDREVQRKAAEQSLQLAASI
YENSSEGMMITDADNLIMAINPAFTRITGYAMEDVIGKNPGILKSGRHDMDFYQAMWNEI
LGTGKWIGEIWDRRKSGEVYPKWLTINTVFNDDGKVHHRIALFTDISQKKESEELIWRQA
NFDHLTGLPNWRMFHDRLEQEIKKSRRVELPLAVVFLDLDHFKEVNDTMGHATGDLLLKE
AALRLSSCVRESDTVARLGGDEFALLLGELSDQDSIERVNECILNKFSAPFQLGNELAYI
SVSIGVTIYPSDATEIEALLRNADQAMYAAKNSGRNRSCYYTQAMQSVAQNRMSLSNDLH
KALAQDQFRLVYQPIVELETGSIHKAEALIRWQHPNRGLVSPADFIPIAEQSGLIIQIGD
WVFRQAANQVKHWRGAYGKDIQISINKSPVQFKSDSNTHLAWFEHLKELDLSGGCFAIEI
TESLLMDASDTIVSKLMAFGNIGMQVALDDFGTGYSSLSYLKKFDIDYIKIDQSFVRNLA
PDSSDLALCEAMIMMAHKLGIKVIAEGVETSEQRDLLRTAGCDYGQGYLFSRPLSTEDFE
GLVWNASLYRSE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccaccatccgacttcagacgtatccatggacatccctgttcatattattggtg
gtgctaggcgccatttcggcagtcgcgatccagagtaaattcgacgatgacctgaagttc
gcacatacgtcggcaacgcagcaattgcagctgatctccactgtgatctcttcggaactc
aatcacgggaactaccagaatatcggccccctgttcgaccactgggcaaaagcggatgcg
agcatcgtcgaattgcaactcgtctccgccaacggtttcaagatcgcggaatacctgcga
ttctcgccagacaggcacatcctcgaacttgacgagcccatctcgtactcctatcgcgaa
gaagccacagctcgtattcgcgtcagcctggagcctgtctatcggcgccaggcaagattc
atcgcgcaattcgccgggatattcctggctttctccatattggccgcactcctgctttac
ttcgccttgcaaagcaaaaaggagtcttccagggccaggcgcataaccaggctgtacagt
gcgttgagcgagatcaatcaggctatcgtgcgcatggagcaggaagaacagctcttcccc
ctggtatgccgttgcgctgtcaaattcggcgggatgaacatggcctgggtcgcgcaggtc
gacaaggaaagcaagctgctgctcccggctgcaagttacggagccgggcaggactacctg
gacgggatcgtcatctcgccccttgcagatgtgcccgaaggccgcggcccggtcggggtg
gcttttcgcgagaaccaccccgtcatcatcaacgactcctccaatgatcctgatttcgcc
ccctggcagaaccgcgcatcagaacaaggctggcattcgattgcggcattcccgatcccg
agaggcggaagaccctttgccgtcttgtcggtttaccatcaacacatcgacgcattcgac
ggcgaatcgattgcgctgctggatgaaatgtcgcgggatatatccttctcactggataac
ttcgatcgggaagtacaacgaaaagcagcggaacaatccctgcaactggcggcctcgatc
tacgaaaacagcagtgaaggcatgatgatcaccgacgccgacaacctgatcatggccatc
aatcccgcattcaccaggatcaccggctatgccatggaggacgtgatcgggaagaatccc
ggcatcctgaaatcgggccgccacgacatggacttctatcaggccatgtggaacgagatc
ttaggcaccggcaagtggataggagagatatgggatcgccgcaagagcggcgaggtctac
cccaaatggttgaccatcaataccgtcttcaacgatgacggcaaggtgcatcatcggatc
gcactgttcacggatatctcccagaaaaaggaatcggaagaattgatctggcgacaagcc
aacttcgatcacctgaccggcctgcccaactggaggatgtttcatgaccgcctggaacag
gagatcaagaaatcccgccgggtcgagttgccgctggcagtcgtattcctcgatcttgac
cacttcaaggaggtgaatgacaccatgggccatgccacaggcgatttgctgctgaaagaa
gctgcactgcgcctgtcgagttgtgttcgcgaatccgacacggtcgcgcggcttggggga
gacgagtttgcacttctcctgggcgaactgagcgaccaggacagcatcgagcgggtcaac
gaatgcatactgaataaattctcggcaccattccagctgggcaacgagctggcctatata
tcggtcagtattggtgtcacgatttacccatccgatgcaacggagatcgaagccctgctc
aggaatgccgaccaggcgatgtatgcggcaaaaaattccggtcgcaaccgctcctgctac
tacacccaagccatgcagtcggtcgcgcagaaccgcatgagtttgtccaatgatctacac
aaggccctggcccaagaccagttcaggctggtataccagcccatagtagaacttgagacc
ggctcgatacacaaagccgaagccctgatacgctggcaacacccaaaccgaggtctggtc
agtcctgccgacttcattcctatcgcagaacaaagcggactgatcattcagatcggtgac
tgggtattccgccaggccgcgaatcaggtgaaacactggcgtggcgcttatgggaaggat
atccagatcagcataaacaagtcaccggttcaattcaaaagcgattcaaatacccatctg
gcatggtttgaacatctgaaagaacttgacttgtccggaggctgcttcgcaattgaaatc
actgaaagcctgctgatggatgccagcgacaccatcgtgagcaagctcatggctttcggg
aatatcggcatgcaggtcgcactcgatgatttcggaacaggatattcctcgctctcgtat
ctgaagaaattcgatatcgattacatcaagatcgaccagtccttcgtgcgcaatctcgcc
cccgattccagcgaccttgcgctttgtgaggccatgatcatgatggcccacaagcttggc
atcaaggtgattgccgagggcgtggaaaccagcgaacaacgcgacctgttgagaacggca
ggatgcgactacgggcagggctatctgttctccagaccgctatccacagaggattttgaa
ggtctggtgtggaatgccagtttgtatcgttccgaatag
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