Sideroxydans lithotrophicus: Slit_1331
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Entry
Slit_1331 CDS
T01196
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_1331
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Slit_1331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
Lon_C
GvpD_P-loop
ChlI
AAA_22
AAA_16
AAA_14
AAA_24
SLFN-g3_helicase
RecA
DUF7125
nSTAND3
AAA_19
ABC_tran
AAA_5
Rad51
NTPase_1
AAA
Elong_Iki1
AAA_28
DUF7129
CobU
ATPase_2
DAP3
MCM
Peptidase_U57
AAA_29
DEAD
NPHP3_N
NACHT
NB-ARC
HypA
Motif
Other DBs
NCBI-ProteinID:
ADE11568
UniProt:
D5CRI2
LinkDB
All DBs
Position
1326127..1327488
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AA seq
453 aa
AA seq
DB search
MAKAKTIYSCTECGGQSPKWQGQCPNCGEWNTLVESVAEASAPAGKNRYSALAASGKLQQ
LAEVEASEVSRTPTGIAEFDRVLGGGLVEGGVVLIGGDPGIGKSTLLLQALAHLSTTKKV
LYVSGEESAQQIALRAKRLSLDAREVHLLPEIQLEKIQATVAHEKPDVVVIDSIQTVYSE
QLTSAPGSVAQVRECAAQLTRIAKSAGVTMILVGHVTKEGALAGPRVLEHIVDTVLYFEG
DTHSSFRLIRAFKNRFGAVNELGVFAMTEKGLREVSNPSALFLSQHGTQVPGSCVMVTQE
GSRPLLVEIQALLDEAHSPSPRRLSLGLEQNRLAMLLAVLHRHAGIACFDQDVFINAVGG
VKITEPGADLAVLLAIVSSLRNRPLPEKMVVFGEVGLAGEVRPVQRGQERLKEAAKLGFT
HAIIPKANAPKHKIDDMEIIAVERVDEAVAKMR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcaaaaacgatctatagctgcaccgaatgcggcgggcaatcgccaaaatgg
caaggccaatgcccgaactgcggcgaatggaacacgctggtggagtcggttgcggaagca
tctgcgcctgccggcaagaatcgctatagcgcattggctgcatccggaaaattgcagcag
ctggccgaagtggaggcgagcgaggtgtcgcgcacgccgaccgggatcgccgaattcgac
cgcgtactgggcggcgggctggtcgaaggtggggtggtgctgatcggcggcgatcccggc
atcggcaaatccaccctgttgctgcaggcactagcacatctctccacgacgaagaaagtc
ctctacgtcagcggcgaagagtccgcgcagcagatcgcgctgcgggccaagcggctttcg
ctggacgcacgcgaagtccatctgctgccggagatacagctggagaagatccaggcaacc
gttgcgcatgaaaagccggatgtagtggtcatcgattccatccagaccgtgtattccgaa
cagttgaccagtgcacctggctcggtggcgcaggtgcgcgaatgtgcggcgcaactcacc
cgtatcgcaaagagcgctggggtgaccatgatcctcgtcggccatgtcaccaaggagggt
gctctggccgggccgcgcgtgctggagcacatcgtcgataccgtgctgtatttcgagggc
gacacgcattccagtttccgcctcatccgcgcgttcaagaaccgcttcggtgcggtgaac
gagctgggtgtatttgccatgaccgaaaaggggctgcgcgaagtgagcaacccgtccgca
ttgttcctgtcgcagcatggtacgcaggtgccgggttcctgcgtgatggtcacccaggaa
ggctcgcggccattgctggtggagatacaggcgctgctcgacgaggcgcattcgcccagt
ccgcgccgcctgtctctcggtctggaacagaaccgtctggccatgctgctggcagtgctg
catcgccacgcgggcatcgcctgtttcgaccaggatgtgttcatcaatgccgtgggcggg
gtgaagatcaccgaaccgggtgccgatctcgccgtcctgctcgcgatcgtttcatcgctg
cgcaacaggccgctgccggaaaagatggtggtgttcggcgaagtggggctggcaggcgag
gtgcgacccgtgcagcgcgggcaggagcgcctgaaagaagccgccaagctcggcttcacc
catgccatcatccccaaagccaacgcgcccaaacacaagatcgacgacatggagatcatc
gctgtggagcgggtggatgaagcagtagcgaagatgcgctaa
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