Sideroxydans lithotrophicus: Slit_1469
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Entry
Slit_1469 CDS
T01196
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
slt
Sideroxydans lithotrophicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Big-like
Pardaxin
Motif
Other DBs
NCBI-ProteinID:
ADE11706
UniProt:
D5CRX0
LinkDB
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Position
1471431..1476932
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AA seq
1833 aa
AA seq
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MMTVRNYFLPTVTLILGLLSNLSAFAAAPPTGVHVGFTAATGSSDFTGATGGCTGCHTAP
TAALAASVYQTYAAAATSNTTYRTYSASSTLIGTNANTFGTPGGMPAANITFAANATNSG
NMSAYFASFQTPVLAAPAAITLTHGQVYSPGYQIVAAAGQDFLVDTTTYTGTSLPPGITV
NLNSGVVSGTAPAPATPTVYNATITATNASASPTGGSASFTIGVNAGQTIAGTAPASVAM
GTSGSFGVTGGGSGNAITVTNTSAAGICNVAISVNTGASATVTITPVGVGACTYTLNQAG
TTVAAGAAGWDAATAAPYSTTIAQGTQTVTTWTAPALPFYANNATATVGATLNSGLTATL
SSQTTSVCTVAGTTVTGIAAGTCTITAAQAGNTNWLTLTAGGQTTSFAVSLASQTITMPV
PSVVVGGGAVAISPTAPSGLAVTLSNTTTSQCTLAGSPGAYTLTGLHAGTNNCVLNATVA
GNTQYAAVTTPQALNVSIGLGTQTISAGTVPTVATGGTGQLNPTSNTANPILYSTSTGSV
CSVSASGLVTAAASTGGQTCTILLDQNATTDYNAATQVAVNITVGLYGQTITLGTVTAVY
YQPAGTTYGTGTISATASNSATPATASPSVTFTSNTPATCSVGLTTGVITGLAGGTNNCT
IVGNVAGVTGVLNPATLTFPSISILQTGQTLGFGAAPSISVGTTANASATSTSAANTATG
LAVTYGTSSASTICTVNASSGAVTGTGVGTCVVTADQAGNANYSAAPRVTQNVSITIGSQ
TLVWGAAPTVSYQGTGSVSATSQVTSNSTPTLLPVTYSSLTPTICSVVSNTGVITGLAGG
TCTIAANQSGTANYSPATQVTQSFAINPIAQSINMTAVTGLVVGGTVTLSSTTTSGLAVT
YSSATTGICTVSGNVVTGVAVGTCTINANQAGDTNYQAATQASQNVTVGQGNQTITFGTA
PAVNVGGTGTVSATASSGLAVTFTSLTSSVCTVTAGTTVNGVTTGTCTIAANQAGNANWT
TAAQVTQTFSITYLPPTAGAASLTAQLNTAATLDLAPFITGIGVTGVSISVQPAHGTISV
SGTRVTYTPNSNYFGSDSFKYLAYNAGGVSPAAAAVSVTVSGRPDPTKDAHVTGLVDIQT
ATVKRFGMAQVFNFQQRLESRHHAAYYPMASASPAGTGSPIGPADSGPPPAPAGGAAPGQ
TQNYFNSWQPGTVLAYANDPQTLMLAPDRLNSGGNNSSPLFGTLMSAVTGAITTSSLNLG
AISNAVGSAQDESFSRLDIWAAGNLRFGTTTQDGVNTQFSTDGISVGVDKRMDRKLTVGM
GMGYARDNSSIGTDGTNSTSSGNSVAGYASYQMDSGNFLDGLLGYGKVNFNTNRYVAAVN
DFARASRTGDQIFGSVSFGYEYHKEGLLWSPYGRFDFDFDRLNAGTESGAGINALSYASQ
NMRTSHLTFGMRGESVHQTTFGVVQPHARFEYQHGLETNGQTSVSYADLLGVQYSIAGTS
QNTNAVVLGLGSDFLLSDKLKLSFDYQRLRSSGFENYQSINFRLTKTLSGKNDLAELLDE
SYNASLEHPSGLLVAAGFAYDDNVSRASEVLDKLSDTIYSLTVSKGLVFAVSRHTRLTVS
GFMDVEKFRNYAGLGHVSGGMQGEYMYRSSGEFGAPTYGIFARFEADQYESTLRDGTHSS
AGLTLRKPLTDRIDLFASVAENAHTGKSDVFNTRDVSGRMNFDYALAVGQTIYLTGEYRK
GDIISSGLPSLKILDIATVFVRDDAFASAGFFDYRMKGRTVLFTLGYNIGFGNKDSADIS
WRRVQSTPDMTPAYASPLNYTVNQLAIVYLMAF
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgtgcgcaactatttcctgccgaccgtcacgttgatattgggacttttgtcg
aatttatctgcgttcgcggcagctccgcccaccggcgtgcatgtgggtttcacggcggcc
accggcagttcggacttcacgggtgcgacaggcgggtgtaccggttgtcacactgcacct
actgcggcgctcgccgcctcggtctaccagacatacgccgccgcagccaccagcaacacc
acctacagaacgtacagcgcctcgtctaccctgatcggcacgaatgccaacactttcggc
acgccaggcggcatgcctgcggcgaatatcactttcgccgccaatgccacgaactcgggc
aacatgtcggcatatttcgcctcgttccagacgcccgtgctggcggctcccgcagccatc
accctcacgcacgggcaagtctatagccccggctaccagatcgttgccgccgctgggcag
gattttctggtggacaccaccacctacaccggtaccagcttaccgccgggcatcactgtc
aacctgaatagcggcgtggtgtctggtacggcgcccgcacccgcgacgccaaccgtttac
aacgcgacgatcaccgcgaccaacgcttcggccagccctaccggcggcagcgcctccttc
accataggcgtgaatgcgggccagaccatcgcaggcacggcgccggcctcggtcgccatg
ggcactagcggcagtttcggcgtcaccggcggcggctcaggaaatgcgatcaccgtgacc
aatacttccgctgcgggcatctgcaatgtcgccatttccgtgaatacgggcgcatcggca
acagtcaccatcacgcccgtgggcgtgggcgcctgcacctacacgcttaaccaggcgggc
accacggtggccgcgggcgcagccggctgggatgccgcaaccgcagcaccttacagcacc
accatcgcgcaaggtacacagacagtcacgacgtggactgcgccggccttgccgttctat
gccaacaatgcaaccgctaccgtaggcgccacgctgaattcaggcctgactgccacgctg
tcttcgcagacgacttccgtgtgcacggtggcgggcacgaccgtcaccggcatcgctgcg
ggaacctgcaccataacggcagcccaggcgggcaataccaactggctgacgctcacggcc
ggtggtcaaaccacctcgtttgccgtgagccttgcttcgcagaccataacaatgcccgtg
ccctctgtggtggtgggggggggcgccgttgcgatctcgcccacggctccttccggtctt
gcagtcactttgtccaataccaccacatcgcaatgtacgttggcgggatcgcctggcgcc
tacacgctcaccggtctgcacgcaggcaccaacaattgcgtattgaacgcgaccgtggct
ggcaatacgcaatatgctgccgtcaccacgccacaggcactgaatgtctcgatcgggctg
ggtacacaaaccatctcggcaggcaccgtgccaacagtggccaccggcggtacaggacaa
ttgaacccgacttccaatacggcgaaccccattttgtattccaccagcaccggatctgtt
tgctcggtttcagcctcgggcttggttactgccgccgcatcaacgggcgggcagacctgc
accatactgctcgaccagaatgcgacgaccgactacaacgcagcaacacaagtggcggtc
aacatcacagttggtttgtatggacagaccatcacgcttggtacggttaccgcagtttac
taccagcctgcggggacaacttacggtaccgggaccatttcagccacggcgagcaattcg
gccacacctgctacagcatctccctccgtgaccttcacatcgaacacgcctgctacatgt
tccgtgggcctgacgactggagtcattaccggactggctggaggaacgaataactgtacc
atcgtcggcaacgtggcaggcgtgactggtgtgttgaatccggcaacgctcactttcccc
tcgatctccatattgcagacaggacagacgttgggtttcggcgctgcgccatccattagc
gttggtaccactgcaaacgccagcgctacttctacttctgctgcgaacacggctacagga
ttggctgtgacctacggcacgagcagtgccagcacgatctgcacagtgaacgcatcttca
ggtgccgtcaccggcactggcgtcggaacctgcgtggtcactgccgatcaggcgggcaac
gcgaattattctgctgccccccgggtgacccagaacgtgtccatcaccatcggtagccag
actctggtatggggcgctgcaccgaccgtgagttaccagggaacgggttcggtcagcgcg
acttcgcaagtcacctccaactccactccgacgctgttgccggtcacatactcgtcgcta
acgccgacgatctgttccgtggtgagcaacaccggcgtgattaccggcctagccggtggc
acctgcaccattgcggccaaccagtctggtacagccaattacagcccggctacgcaagtc
acccaatcatttgccatcaatccgatcgcgcagagcatcaacatgacggcggtgacaggt
ttggtggtgggaggcacagttactttaagttcgacaacaacgtcaggacttgcagttacc
tatagttccgcaacgaccggtatttgtactgttagcggcaatgtcgtcaccggtgtggcg
gtgggtacttgtaccatcaatgccaaccaggcaggtgacaccaattaccaggctgctacg
caggcatcccagaacgttaccgttggacaaggtaaccagacaatcactttcggcactgcg
ccagcggtgaatgtggggggcacaggtaccgtgagcgccactgcatcgtctggcctggct
gtaactttcaccagcctgacctcaagcgtatgcacggtgacagcaggtacgactgttaat
ggcgtgaccacaggtacctgtaccattgcagcgaaccaggctggcaatgcaaactggact
acggcggcacaagtcacgcagaccttctcgatcacttacctgccacccacagctggcgcg
gcaagcctgacggcccaactcaacacggccgcaacacttgatctggcaccgttcattaca
ggcataggggtcaccggtgtcagcatctcggtgcagcctgcacatggcacgataagcgtg
tccgggaccagggtgacctacacacccaactcgaattatttcggttcggacagcttcaaa
tatcttgcttacaacgctggaggagtatcgccagccgccgccgcagtgagtgtgacggtt
tccggtcgtcccgatccaaccaaggatgcacacgtgaccggactggtcgatatccagacg
gccaccgtcaaacgttttggcatggcacaagtgttcaatttccagcaacgcctggaatcg
cgccatcatgcggcttactatccgatggccagtgcatctcctgcaggcacgggaagccca
ataggccctgcagattccggacctcctcctgcgcccgccgggggggcggctcccggtcag
acgcaaaactatttcaacagttggcaaccgggcaccgtactggcttatgcgaacgaccct
cagacactgatgcttgcgccggatcggctgaacagcggaggaaacaattccagcccgctg
ttcggtacattgatgagtgctgtcacgggagcaataacgacttcgagtttgaatctggga
gcgatctccaatgcggtcggctcggcgcaggacgaatcgttcagcaggcttgatatctgg
gctgcaggcaacctgcgtttcggaacgacgacacaagacggcgtgaatacgcaattcagc
acggacggcatcagcgtcggtgtcgacaagcggatggaccggaagctgaccgtcggcatg
ggcatgggctatgcgcgcgacaacagcagcatcggcacggacggtacgaacagcacttcc
agcggcaacagcgttgccggttatgccagctaccagatggattcgggtaacttcctcgat
ggcttgctgggatacggcaaggtgaatttcaacaccaatcgctatgtggctgcggtgaac
gattttgcccgggcctcgcgcaccggcgaccagatattcggttctgtatcgttcggttac
gagtaccacaaggaagggttgttgtggtcgccgtatggccgcttcgatttcgatttcgac
cggctgaatgcgggaacggaaagcggggcgggcatcaatgcgctgagctatgccagccag
aacatgcgcacctcgcatctcaccttcggcatgcgcggcgagtctgtccatcagaccact
ttcggcgtggtacagccacatgctcgcttcgaatatcagcacggcctggaaacgaatgga
cagacttccgtttcctatgccgatctgctgggagtgcagtactcgatcgctggaacttcg
caaaataccaatgccgtcgtccttggcctgggcagtgatttcctgctgagcgacaagttg
aagctttctttcgactaccagcgcttgcgttcgagcggattcgagaactatcagtcgatc
aacttccgtctcaccaaaacgctcagcggcaaaaacgatcttgccgaactgctggatgaa
agttacaacgcatcgctcgaacatccttccggactgctcgttgcagccggatttgcttac
gacgacaacgtcagtcgcgccagcgaggtgctggacaagctatcggataccatctacagc
ctgacagtgagcaaaggcctggtgttcgccgtctcgcggcacactaggctgacggtgagc
ggattcatggatgtcgagaaattccgcaattacgcaggactcggacatgtctcgggcggc
atgcagggcgaatacatgtatcgcagctcgggcgagttcggcgcacccacctacggcatc
ttcgcacgcttcgaggccgatcagtatgaatccaccttgcgcgacgggacgcacagctcc
gcgggcctgaccctgcgcaagccgctaaccgaccgcatcgatctcttcgcctcggtggct
gaaaatgcgcatacaggcaagagcgatgtgttcaatacgcgggatgtatcgggacgcatg
aatttcgactatgcactggctgtcgggcagacgatctacctgaccggagagtaccgaaag
ggcgacatcatctcttccgggctgccctcgctgaagatactggatatcgcaaccgtcttc
gtacgcgacgatgcatttgcctcggcgggattctttgattaccggatgaaagggcgaacc
gtgctgttcaccctgggctataacatcggcttcggcaacaaggattccgcggatatctcc
tggcgtcgagtgcaatcgacgccggacatgacgccggcttatgcgtcgccgctcaactat
acagtcaaccagctcgccatcgtttatctgatggcattctag
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