Sideroxydans lithotrophicus: Slit_1484
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Entry
Slit_1484 CDS
T01196
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slt03016
]
Slit_1484
Enzymes [BR:
slt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Slit_1484
Transfer RNA biogenesis [BR:
slt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Slit_1484
Prokaryotic type
Slit_1484
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADE11721
UniProt:
D5CRY5
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All DBs
Position
1494940..1495881
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AA seq
313 aa
AA seq
DB search
MTKKTEQFKRVKRPLDGVLLFDKPLELSSNTALQKVRRLYGAEKAGHTGTLDPLATGLLP
VCFGEATKFTTALLDADKRYRATIRLGQRTTTGDAEGEITETRQVEVNETQARAVLAMFM
GETQQLPPMHSAIKHQGRPLYEYIRKGETVERELRPVFIRELTLERLQGDELEFSVLCSK
GTYVRTLAEDISEKLGCGGHLVALRRTGIGEFSLKDAYTLAQLEGMDDVQRDASLLPLDR
LVQNLPRLELDEVQANRLAQGQRLGLSDMYPDGKRRLYAAGRFIGLGDLEGGRLSPSRLL
SSVAKMAAKRESA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaaaagactgagcaattcaaacgcgtcaaaaggccgctagatggcgtcctgctg
ttcgacaagccgctggagctcagttccaacaccgccctgcaaaaagtccgccgtctatat
ggcgccgaaaaggccggacataccggcacgctcgatcctctggccaccggcctgttgccg
gtctgtttcggcgaagccaccaaattcaccactgccttgctggatgccgacaagcgatat
cgcgcgacgatacgcttggggcagcgcacgacgacgggcgatgccgaaggcgagatcacc
gaaacgcgccaggtcgaagtgaacgaaacgcaagctcgggcagtactggcgatgttcatg
ggcgaaacgcaacagctgccgcccatgcacagtgccatcaaacatcagggcaggccgctg
tatgaatatatccgcaagggcgaaaccgtggaacgcgagctgcgcccggtgtttattcgc
gaattgacgctggaacgactgcagggagacgaactggaattcagcgtgctgtgcagcaag
gggacatatgtccgcacgctggcggaagatatcagtgaaaaactgggttgcggtggacac
ttggtcgccttgcggcgtaccggaatcggcgagttcagcctgaaggatgcctataccctc
gctcagcttgaggggatggatgatgtgcaacgcgatgccagcctgttgccgctggataga
ctggtacagaacctgccgaggctggagctggatgaagttcaggcgaatcggcttgcacaa
ggacaaagattggggttgagcgatatgtaccctgacgggaaacggcgtctgtacgccgcc
ggacgattcatcggcctgggcgacctggagggcgggcggctgtctccgagccgcctgctg
tccagtgtggccaagatggctgcaaagcgcgaatcagcttga
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