Sideroxydans lithotrophicus: Slit_1536
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Entry
Slit_1536 CDS
T01196
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt03030
DNA replication
slt03430
Mismatch repair
slt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Slit_1536
03430 Mismatch repair
Slit_1536
03440 Homologous recombination
Slit_1536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slt03032
]
Slit_1536
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_1536
Enzymes [BR:
slt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Slit_1536
DNA replication proteins [BR:
slt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Slit_1536
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Slit_1536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
QueC
Motif
Other DBs
NCBI-ProteinID:
ADE11772
UniProt:
D5CS36
LinkDB
All DBs
Position
1544141..1545148
Genome browser
AA seq
335 aa
AA seq
DB search
MKPLYPWQSESWQALQGLRNRLPHAVLLKGAQGIGKLDLAMNFAQSLLCEKPNADGTACH
TCNSCHWFEQENHPDFRLVQPDALSSADEGDEKQGGKKPSREISVDQIRNLSNFANLSAH
CGGYRVVLIHPAESMNNNAANSLLKTLEEPTDNLLFLLISHKPQQLLPTILSRCLGFTVS
TPTRELGTAWLEQQGVKNPAHALAQSGFAPLQALGWSESGEGAEERSILLNAIRQPSKMD
ALALADGLQRSAPIYSIHCLQQWCHDLTSAKLAGMVRYFPEQAGEITKLANGVSSDALLR
FQKELLEARRAAYHPLNPKLFLESLLLSYRQLFAI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccactctatccatggcagtctgaatcttggcaagccctgcaagggctgcgcaac
agattgccacatgccgtgctgttgaagggtgcgcaaggcataggcaagctggatctggcg
atgaattttgcccagtccctgctttgtgaaaaaccaaatgcagacggaacggcttgccat
acatgcaattcctgccattggtttgaacaggaaaatcatcccgattttcgtcttgtccaa
cccgatgcgctgagttcggccgatgagggcgacgaaaagcagggcggcaaaaaaccgtca
cgcgagatatcggtggatcagatacgcaacttgtccaacttcgccaacctgtctgcccat
tgcggcggctaccgcgtagtgctgatccatccggccgaatccatgaacaacaatgcggcc
aactccctgctgaaaacgctggaagaaccgactgataatttgctgtttcttctgatcagc
cataagccgcagcagttgttgccgaccatcctgagccgttgtcttggctttacagtaagt
acgccgacacgcgagctcggcacagcctggctcgagcagcagggcgtaaagaaccctgca
catgcgctggcgcaaagcggattcgctcccctgcaggcattaggctggtctgaatcgggc
gagggtgctgaggaacggagcatcttgctgaatgctatccgccaaccttccaagatggat
gctttggctctggctgacggcctgcagcgtagcgcgccgatatattccattcattgcctg
cagcagtggtgccacgacctgacgagcgcaaaacttgcaggcatggtgcggtatttcccc
gaacaggctggcgagatcaccaagctggctaacggtgtctcatccgatgcgttgctgcgt
ttccagaaagagctgctggaagcccgtcgtgcagcctaccatccgcttaacccgaaactg
tttctggaatccctgttattgtcatatcgtcagctgttcgccatttga
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