Sideroxydans lithotrophicus: Slit_1605
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Entry
Slit_1605 CDS
T01196
Name
(GenBank) ABC transporter related protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt02010
ABC transporters
slt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Slit_1605
03070 Bacterial secretion system
Slit_1605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slt02000
]
Slit_1605
02044 Secretion system [BR:
slt02044
]
Slit_1605
Transporters [BR:
slt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Slit_1605
Secretion system [BR:
slt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Slit_1605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
RsgA_GTPase
DEAD
SbcC_Walker_B
AAA_14
AAA_16
AAA_30
Zeta_toxin
APS_kinase
AAA_18
AAA_15
TXNDC16_3rd
RNA_helicase
AAA_23
AAA_28
Cytidylate_kin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADE11838
UniProt:
D5CSA2
LinkDB
All DBs
Position
complement(1624777..1627119)
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AA seq
780 aa
AA seq
DB search
MPRRLLKIVSSSLSREPSRPSPIFTFALEDMVWAMGSFCALNRKPFDAELLAKQFPPPYT
SDSFIHAARALGFRIKRRDIECAGLSSLNLPCLVVLNEAEPVMQSDAEAEVVPVAQHTAP
EQPGTPGLAAVQEETAETVGILPVELPPAPPKFHPAIVVQMTAESVILFEVGTNTPKTLT
QAEFATRFAGTAFQLALETKGIQDPDGALNKQAEFGFNWFIPELLKHKRIWRDVLIASFI
IQLLGLVTPLFTQVIIDKVVVHRTESTLIVIGIALAVFMVFSALLSWVRQYLILHTGNRV
DAVLGHAVFEHLFKLPPRYFEQRPTGVIAARLHGVETIREFIASAAVTLILDFPFLLIFL
AMMLYYSVLLTCIALAIMGVITIMSFIVAPLFRTRLNEQFMLGARNQAFTTEYVSGLETV
KSLQMEPQLNARYSDYLAEYLRTGFNVRQIGNTYNVISNGLEQMMTLLILIVGAYTVMNS
SDFSIGMLIAFQMYASKVSQPMLRLVGLWQQFQQANMSVQRLGDIMNAPMEPYSVLPSRM
REGKGQIDIEALSFRYAEDRPFLYQNFNLKVAPGKVVAIMGPSGSGKSTLTKLLQGFYQP
ASGTIKIDGNDIRYLSANELRHYFGVVPQETVLFSGTIYDNLLMANPHTTFDQIVQCCKM
AEIHSAIEALPQGYQTEIGERGVGLSGGQKQRMAIARALIKQPKILVFDEATSSLDSNTA
EHFAATINQLKGKVSMLFITHAMPKNLLVDEVVRIGQGSLSAVSDSNDSPKKEADGGVHG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcggctgctcaagatcgtttccagcagcctgtcgcgggagccttcccgtcct
tcacccatattcacttttgcacttgaagacatggtctgggccatgggcagtttttgcgcc
ctgaaccgcaagcccttcgatgccgagttgctggccaagcaatttccaccaccctacacc
tcggattcctttatccatgctgcaagagcgttgggttttcggatcaaacgaagggatatc
gagtgcgccggattatccagcctcaacctgccgtgtctggttgtactgaatgaggccgaa
ccggtcatgcagtctgacgctgaagccgaagttgttccggttgctcagcacacagcgcca
gagcaaccaggtacacctggcctcgcagcggtccaagaagaaactgcagaaaccgttggc
atcctaccggtagaactaccacccgcaccacccaaattccatcccgccatcgtcgtgcag
atgactgccgagagcgtgatcctgttcgaggtcggcaccaacacccccaagaccctgacg
caagcagaattcgccacgcgttttgcaggcacagccttccagctggcactcgaaaccaag
ggcatccaggaccccgatggtgcattaaacaaacaagctgaattcggcttcaactggttc
atccctgaattgctgaaacacaagcgcatctggcgcgacgtgctgatcgcttccttcatt
atccagttgctggggctggtgacgccgctattcacccaagtcatcatcgataaagttgtt
gtccaccgaaccgaaagcaccctgatcgtcatcggcatcgcactggccgtattcatggtg
ttctcagccttgctgtcctgggtgcgccagtacctcatcctgcataccggcaaccgggtg
gatgccgtgctggggcatgccgtgttcgagcacctgttcaagctcccgccgcgctacttc
gaacagcgcccgaccggtgtcatcgccgcccgcctgcatggggtggaaaccatacgcgaa
ttcattgccagtgccgccgtcaccctcatcctggattttccgttcctgctgatcttcctc
gccatgatgctttactacagcgtgctgctgacctgtattgcactggccatcatgggtgtg
atcaccatcatgagcttcatcgtcgcccctttgttcaggacccggttgaacgaacaattc
atgctcggtgcgcgcaaccaggcatttaccaccgaatacgtatcaggtctggaaaccgtc
aagagcctgcaaatggaaccccagctcaatgcccgttatagcgactacctggccgaatac
ctacgtaccggtttcaacgtccgccagatcggcaacacctacaacgtcatctccaacggc
ctcgaacaaatgatgaccctgctcatcctgatcgtgggtgcctataccgtgatgaacagc
agcgacttctccattggtatgctcatcgccttccagatgtacgccagcaaagtgtcgcaa
cccatgctgcggctggtggggctgtggcagcagttccagcaagccaatatgtccgtgcag
cgcctgggcgacatcatgaacgccccgatggaaccgtattcggttctgcccagtcgcatg
cgcgaaggcaagggccagatcgacatcgaagccttgagcttccgctatgccgaagatagg
cctttcctgtaccagaacttcaacctcaaggtcgcccccggcaaggtggtcgccatcatg
gggccatcgggctcaggcaaaagcacgctcaccaaactgctgcaaggcttctaccagccc
gccagcggcaccatcaagatcgatggcaatgacattcgctacctttcagcgaatgagttg
cgccactacttcggcgtggtgccgcaggagacggttcttttctccggcaccatctacgac
aacctgctgatggccaacccgcataccaccttcgaccagatcgtgcagtgttgcaagatg
gccgaaatccacagcgccatcgaagctctgccgcaaggctaccagaccgagatcggcgaa
cgcggtgtgggactctccggtggacaaaagcaacgtatggccatcgcaagagccctcatc
aaacaacccaaaatactcgtcttcgacgaagccaccagcagtctggattccaacaccgcc
gaacatttcgccgccaccatcaatcagctcaagggcaaagtctcgatgctgttcattacc
cacgccatgcccaagaatctgctggtggatgaggtggtgcggatagggcaggggtcgctt
agtgcggtgagtgactcgaacgactcacccaagaaggaagctgacggtggagtgcatggg
taa
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