Sideroxydans lithotrophicus: Slit_1765
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Entry
Slit_1765 CDS
T01196
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Slit_1765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_1765
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Slit_1765
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Slit_1765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
Orbi_NS3
Motif
Other DBs
NCBI-ProteinID:
ADE11996
UniProt:
D5CSR0
LinkDB
All DBs
Position
complement(1779220..1781244)
Genome browser
AA seq
674 aa
AA seq
DB search
MKTITFPDSPYLLHLPFEPSGDQPTAIAQLVEGIEDGLAYQTLLGVTGSGKTFTMANVIA
RTGRPAILMAPNKTLAAQLYSEMRDFFPENAVEYFVSYYDYYQPEAYVPSRDVYIEKDSS
INEQIEQMRLSATKSMLERQDCVIVATVSAIYGIGDPVDYHGMILHLREHEKMAQRDVIQ
RLVAMQYERNDIDFNRGHFRVRGDVIDIFPAESSENALRVTLFDDEVESLSLFDPLTGHI
QTRVPRYTVYPSSHYVTPRETTLHAIETIKVELAERIAFFVKENKLVEAQRIEQRTRHDL
EMLAEIGFTKGIENYSRHLSGRGPNEAPPTLMDYLPPNALMIIDESHVTIPQIGGMYKGD
RARKENLVNYGFRLPSALDNRPLRFDEFEKIMRQTIFVSATPSTYEAEHTGQVVEQVVRP
TGLIDPTIDVRPATNQVDDLMSEVTLRTNVGERVLVTTLTKRMAEDLTEYFSEHGIKVRY
LHSDIETVERVEIIRDLRLGMFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSL
IQTIGRAARHLHGTAILYADRITDSMRKAIDETDRRRAKQVAYNEAHGITPQSVVKRIKD
IIDTEYDMDAERKSLKLAQTEAKYLAMSEKEVSREIAKLEKEMLQAAKNLEFEKAAQLRD
QLKKLRESVFLSPL
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatcaccttccccgacagcccctacctgctgcacctgccattcgagccgagc
ggcgaccagcccacagccatcgcacagctggtggaaggcatcgaggacggcctggcgtac
cagacgctgctgggcgtgaccggttccggcaagaccttcaccatggccaacgtgatcgcg
cgcaccgggcggccggccatcctgatggcgccgaacaagacactggcggcgcaactgtat
tccgagatgcgcgatttctttcccgagaacgcggtcgaatattttgtttcctattacgac
tattaccagcccgaggcctatgtgccgtcgcgcgatgtgtatatcgaaaaggattccagc
atcaacgagcagatcgagcagatgcgcctgtcggccaccaaatcgatgctggagcggcag
gactgcgtgatcgtcgccaccgtctcggccatctacggtatcggcgacccggtggattac
cacggcatgatcctgcacctgcgcgagcacgagaagatggcgcagcgcgatgtgatccag
cgcctggtggcgatgcagtacgagcgcaacgacatcgatttcaaccgcggccacttccgc
gtgcgcggcgacgtgatcgacatcttcccggcggaaagcagcgagaacgcattgcgcgtg
acgctgttcgacgacgaggtggaatcgctgtcgctgttcgacccgctcaccggccacatc
cagacgcgcgtgccgcgctacaccgtgtatccctccagccattacgtgacgccgcgcgag
acgaccctgcacgccatcgagaccatcaaggtggagctggccgagcgcatcgccttcttc
gtgaaggagaacaagctggtggaggcgcagcgcatcgagcagcgcacgcgccacgacctg
gagatgctggccgagatcggtttcaccaagggcatcgagaactattcgcgccacctttcc
gggcgcggtccgaacgaagcgccgccaacgctgatggattacctgccgccgaacgcgctg
atgatcatcgacgagagccacgtcacgatcccgcagatcggcggcatgtacaagggcgac
cgcgcgagaaaagaaaatctggtcaattacggcttccgcctgccgtccgcactggacaac
cgtccgctgcgcttcgacgagttcgagaagatcatgcgccaaaccatcttcgtctcggcc
acgccttccacctacgaagccgaacataccgggcaggtggtggagcaggtggtgcgcccg
accggactgatcgacccgaccatcgacgtgcgtccggccaccaaccaggtggacgacctg
atgtcggaagtgaccttgcgtaccaacgtgggcgaacgcgtgctggtcaccacgctgacc
aagcgcatggccgaagacctcaccgaatatttctccgagcacggcatcaaggtgcgctac
ctgcactcggacatcgagacggtggagcgtgtggagatcatccgcgacctgcgcctcggc
atgttcgacgtgctggtgggcatcaacctgttgcgcgaggggctggatattcccgaggtg
tcgcttgtcgcgatcctggatgcggacaaggagggcttcctgcgttcagagcgctcgctg
atccagaccataggccgcgccgcgcgccacctgcacggcacggccatcctgtatgccgac
cgcatcaccgactcgatgcgcaaggccatcgacgagaccgaccgccgccgcgccaagcag
gtggcctacaacgaagcgcacggcatcacgccgcaatccgtggtcaaacgcatcaaggac
atcatcgacaccgagtacgacatggatgccgagcgcaaatcgctgaagctggcacagacc
gaggccaagtatctggcgatgagcgagaaggaagtatcgagggagatcgccaagctggag
aaggagatgctgcaggctgccaagaacctggagttcgagaaggccgcgcaactgcgcgac
cagttgaagaaattgcgcgagagcgtgttcctctcccctctgtaa
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