Sideroxydans lithotrophicus: Slit_1803
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Entry
Slit_1803 CDS
T01196
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpX
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
slt03110
]
Slit_1803
Chaperones and folding catalysts [BR:
slt03110
]
Heat shock proteins
HSP100
Slit_1803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
zf-C4_ClpX
AAA
ClpB_D2-small
AAA_5
AAA_22
Mg_chelatase
RuvB_N
MCM
Sigma54_activat
AAA_14
Sigma54_activ_2
AAA_18
NACHT
AAA_16
TIP49
AAA_7
T2SSE
AAA_28
IstB_IS21
AAA_24
ResIII
ABC_tran
AAA_33
DEAD
TsaE
PduV-EutP
nSTAND3
AAA_25
AAA_29
AAA_PrkA
SKI
AAA_30
RNA_helicase
FtsK_SpoIIIE
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
ADE12032
UniProt:
D5CSU6
LinkDB
All DBs
Position
complement(1816946..1818202)
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AA seq
418 aa
AA seq
DB search
MTSDKNKGDKLLYCSFCGKSQHEVRKLIAGPSVFVCDECIALCNDIIREETQSSIGGDKS
DKSELPVPHEICARLDEYVIGQRQAKKILSVAVYNHYKRLKSTDADGVELAKSNILLVGP
TGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQACDYDVERAQRGI
VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTKASIPPQGGRKHPNTEFLQVDT
SNILFICGGAFDGLEKVIRNRSEKAGIGFSANLAKRDESNDIGKVLRGVEPEDLIKFGLI
PEFVGRLPVVATLEGLDEAALIQILTEPKNALTKQYQKLFSMEGVELEFREGVLNVIAKK
ALERKTGARGLRSILENALLDTMFDLPSAENVSKVVLDENSAGEIKPIVMYADTPKAA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggacaagaacaagggtgacaagctgctgtactgctcgttctgcgggaaaagc
cagcatgaggtgcgcaagctgattgcgggcccgtcggtattcgtgtgcgacgagtgtatc
gcgctgtgcaacgacatcattcgcgaagagacacaaagcagcatcggcggggacaagtca
gacaagagcgagttgccggttcctcatgagatttgcgcacgtctggatgagtatgtcatt
gggcagcgtcaggcaaaaaagattctgtcggtggctgtatataaccactacaagcgcttg
aagagcactgacgcggacggtgtcgaactggcaaagagcaatatcctgctggtcggaccg
actggctcgggcaagaccttgctggcgcagacgctggcgcggttgctcaatgtgcctttc
gtgatggcggatgccactacgctgacagaagcgggttatgttggcgaggatgtcgagaac
atcatccagaaattgctgcaggcctgcgactatgatgttgagcgtgcgcaacgcggtatc
gtctacatcgacgagatcgacaagatctcgcgcaaatccgacaacccttccattacccgc
gatgtgtcgggtgagggcgtgcagcaggcactgctgaaactgatcgagggcaccaaggcg
tctatccctcctcagggcggacgcaagcatccgaataccgagttcctccaggtggatacc
agcaatatactgttcatctgcggcggtgcattcgacggtctggagaaggtgattcgcaac
cgctccgagaaagcaggtataggtttctccgccaatcttgccaaacgcgatgaaagtaac
gatatcggcaaggtgttgcgcggagtggagccggaagacttgatcaagttcggtctgatt
ccagagttcgtcggccgcctgccggtggtggcgacactcgagggattggatgaggcagcc
ttgatccagatattgaccgagccaaaaaatgcgcttaccaagcagtatcagaaactgttc
tcgatggaaggtgtggaactggagttccgcgaaggcgtgttgaatgtgattgcaaaaaag
gcgctggaacggaagaccggtgcgcgcggattacgctcaattcttgaaaatgccttgctg
gataccatgttcgatctgccgtcggcggaaaacgtgagcaaagtagtgcttgacgaaaac
agtgcgggtgaaatcaagcccatcgtgatgtatgcggatacgcccaaggccgcgtaa
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