Sideroxydans lithotrophicus: Slit_1859
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Entry
Slit_1859 CDS
T01196
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00061
Fatty acid biosynthesis
slt00071
Fatty acid degradation
slt01100
Metabolic pathways
slt01212
Fatty acid metabolism
slt02024
Quorum sensing
slt04146
Peroxisome
Module
slt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Slit_1859
00071 Fatty acid degradation
Slit_1859
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Slit_1859
09145 Cellular community - prokaryotes
02024 Quorum sensing
Slit_1859
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slt01004
]
Slit_1859
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slt04147
]
Slit_1859
Enzymes [BR:
slt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Slit_1859
Lipid biosynthesis proteins [BR:
slt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Slit_1859
Exosome [BR:
slt04147
]
Exosomal proteins
Exosomal proteins of breast milk
Slit_1859
Exosomal proteins of breast cancer cells
Slit_1859
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Gag_p24
Motif
Other DBs
NCBI-ProteinID:
ADE12088
UniProt:
D5CT02
LinkDB
All DBs
Position
complement(1889437..1891245)
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AA seq
602 aa
AA seq
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MTAAQNDDVISPQQAVTLHGLFLERVRRSQDKIAYKFFDVRQSVWVDLSWGQMLEQVARW
QAALAREGLVKGDRVAIMLRNCPQWVMFDQAAMSLGLITVPLYTVDRADNIAYIVNDAQV
KVLLFETEAQWQELSGVVGQMGCVQRFVSLDDFRNDEPRLVPAAKYLLTQLAELQAPVPC
DCKELASIIYTSGTTGRPKGVMLSHNNMLSNTYDAMATFMVRGDDLLLSFLPLSHTFERT
CGYYLQVMTAATVAYARSIPLLSEDLKTIKPTILISVPRIYERIYGAISTKLAEGPAFKR
MLFHLAVEVGWARFLHQQRRGGWKPSFLLWPLLDKLVAQKILERLGGRLRTTVSGGAALA
PEISRVFVGLGLPVVQGYGLTETSPIVSGNKLDNNFPDSVGQPIRGVQVKLGEQHALLVK
GPNVMMGYWNNPEATRAMIDADGWLNTGDIAHISETGHIYITGRLKEIIVLSNGEKMPPA
DMEAAILHDPLIDQVMIYGEGRPYLIALAVLNPEVWLQVAAKVGVRPDMPESLTDSAVEA
KVLRRIARNLSGFPGYAKVHRVLLLREPWTIDNGLLTPKLSLKRNHVVAAFSRQIDELYK
GH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagcacaaaacgacgatgtgatatcgccgcagcaggcggtgacactgcacggc
ctgttcctggaacgtgtacggcgctcgcaggacaagatcgcctataaattcttcgatgtg
cggcagtcggtctgggtcgacctgagctgggggcagatgctcgagcaggtggcgcgctgg
caggctgcgctggcgagggaaggactggtcaagggtgatcgcgtcgccatcatgttgcgc
aactgtccgcaatgggtgatgttcgaccaggccgcgatgtcgctggggctgatcaccgtg
cccctgtacaccgtggatcgcgcggacaacatcgcctatatcgtcaacgatgcgcaagtg
aaggtgctgctgttcgagaccgaagcgcaatggcaggaactctccggcgtggtcgggcag
atgggttgtgtgcagcgcttcgtgtcgctggacgatttcaggaacgatgagccgcgtctg
gtgcctgcggcgaaatatctgctcactcaactggcagagttgcaagcgcctgtcccgtgc
gactgcaaggaactcgccagcatcatctacacctcgggcaccaccggcaggccgaagggc
gtgatgctgagccacaacaacatgctgagcaatacctacgatgcgatggctaccttcatg
gtacgcggcgacgacctgctgctttccttcctgccgctgtcgcataccttcgagcgcact
tgcggctattacctgcaagtgatgacggcggcgacggtcgcctatgcgcgctccatcccg
ctgctgtcggaagacctgaagaccatcaagccgaccatcctgatctcggtaccgcgcatc
tacgaacggatctacggcgcgatcagcaccaagctggccgaaggcccggcattcaagcgc
atgctgttccacctggccgtggaagtgggctgggcgcgcttcctgcatcagcaaaggcgc
ggcggctggaaaccctcgttcctgctgtggccgctgctggacaaactggtggcacaaaag
atactggaacgcctcggcgggcgcctgcgcaccacggtcagcggaggcgcggcgctcgcg
ccggagatctcgcgcgtgttcgtcggcctgggattgccggtggtgcaaggctatggactc
accgagaccagtcccatcgtttccggcaacaagctcgacaacaacttccccgacagcgtg
ggccagccgatacgcggcgtgcaggtgaaactgggcgaacagcacgccctgctggtgaag
gggccgaacgtgatgatgggctactggaacaatccggaagcgaccagggccatgatcgac
gccgatggctggctgaacaccggcgacatcgcgcatatcagcgaaacgggccacatctac
atcaccggtcgcctgaaagagatcatcgtgctgtccaacggcgagaagatgccgcccgcc
gacatggaggccgccatcctgcacgacccgctgatcgaccaggtgatgatctacggcgaa
ggacgtccgtacctgatcgcgctggccgtgctcaatccggaggtgtggttgcaggtcgct
gccaaggtcggtgtgcgtcccgacatgccggaatcgctgaccgacagcgcggtggaagcc
aaggtgttgcggcgcatcgcgcgcaacctgagcggctttcccggctatgccaaggtgcat
cgcgtgctgctgctgcgcgagccgtggaccatcgacaacggtttgctcacgcccaagctg
agcttgaagcgcaaccatgtggtggcggcgttcagcaggcagatcgacgaactttacaag
gggcactga
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