Sideroxydans lithotrophicus: Slit_1981
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Entry
Slit_1981 CDS
T01196
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Slit_1981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slt02000
]
Slit_1981
Transporters [BR:
slt02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Slit_1981
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
Mg_chelatase
AAA_22
AAA_29
NACHT
AAA_25
AAA_5
AAA
AAA_16
RsgA_GTPase
nSTAND3
TniB
AAA_7
ATPase
AAA_19
TsaE
NB-ARC
MobB
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
ADE12210
UniProt:
D5CTC4
LinkDB
All DBs
Position
complement(1996663..1998654)
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AA seq
663 aa
AA seq
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MTQLRVENLVVRLHGGANIVDDVSFDIAAGETFALLGESGCGKSMTALSLMRLLPDGVVN
GGGAVHMDGTALFDLPERAMRDFRGGKMAMIFQEPGLSLNPVMTVGQQIAEVLALHRDLK
GSGARERCIELLDQVGIPDAARRLDEYPFQLSGGMKQRVMIAMALAGSPQLLVADEPTTA
LDVTIQAQVLQLLRETQSRTGMAMLLITHDLGVVAENAHRVGVMYAGQIVEQATRTQLFA
QPLHPYTQKLFAALPSAAHAGRALNAIPGNVPALGSIKQGCRFAARCDRAWSMCREQTPG
WTLVEGQGVRCHLYGRDGIEQRALKDRKGGEDRHATGVVPVPNSHPGPLLQVEGLQVHFP
IRKGILQRVVGQVKAVDGVSLTIPQQHTLALVGESGCGKTTLGKALLQLIAPTQGSIRFD
GRELIGSSAYRAAMQMVFQDPYASLDPKMRVAEILEEGMSALNIGGGSSERQAHIDGLLD
KCGLSRDSKWRYPHEFSGGQRQRIAIARALAVSPQLLVCDEPTSALDVSVQAQILNLLKS
LQQELGLSYLFITHNLAVVEYLAQEVCVMYLGRIVERGTTEEVIRSPKHPYTQALLSAVP
RMDDSGRKYVRLEGDMPSSANPPQGCHFAPRCPQAMSACMIYPEARRCSNTHSLSCHLYP
DPT
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaactcagggtcgagaacctcgtcgtgcgtctgcatgggggagccaatatcgtt
gatgatgtttcgtttgatatcgctgccggggagacctttgccctgctgggcgagtccggt
tgcggcaagtccatgacagcactctcgttgatgcgcttgttgccggacggcgtggtgaac
gggggcggtgccgtacacatggatggcaccgcgctgttcgacttgcctgagcgcgcgatg
cgcgattttcgcggcggcaagatggcgatgatctttcaggagccgggattgagcctgaat
ccggtgatgacagtgggccagcagatcgccgaggtgttagcgctgcaccgggatttgaag
ggttccggagcgcgagagcgctgtatcgagttgctcgatcaggtcggcattccggatgcg
gcgcgacggctggatgaatatccgttccagctttcgggcggcatgaagcagcgcgtgatg
atcgcaatggctctggcgggaagtccccaactgcttgtcgccgacgaacctaccactgcg
ctggatgtgacgatacaggcccaggtgctgcaactgctgcgcgaaacgcaatctcgaacg
ggcatggcgatgctgctcatcacgcatgatctcggagtggtggctgagaatgcgcatcga
gtcggtgtgatgtatgccgggcaaatcgtggagcaggctacacgcacgcagttgttcgcc
cagccgttgcatccctatacgcagaaattgtttgctgctttgccgagtgcggcacatgcc
ggacgagctttaaacgccattccaggcaacgtgccggctttgggcagcatcaagcaggga
tgccgtttcgctgcgcgttgtgaccgggcctggtccatgtgtcgagagcagacacctggc
tggaccttggtcgaagggcagggtgtgaggtgtcatctgtacggcagggatggaatagag
caaagggcactgaaagatcggaaaggcggagaggataggcatgcgaccggagtcgtccca
gtgcctaattctcatcctggccccctgttgcaggttgaaggactgcaagttcatttcccc
atccgcaaaggcattttgcagcgcgtggtcgggcaggtgaaggcggttgacggcgtatca
ctcacaataccgcaacagcatactttggcgctggtgggggaatccggatgcggcaagact
acgttgggcaaagcgttgctgcaacttatcgcacctacacaaggcagcatccggttcgat
ggtcgcgagttgatcggttcgagcgcatatcgtgctgcgatgcagatggtgtttcaggat
ccctatgcttcgctcgatccaaagatgcgggtggcggagatactcgaggagggcatgagc
gcgctgaacattggcggcggtagcagcgaacggcaggcgcatatcgacggcttgctggac
aagtgcggcctgtcccgggacagcaaatggcgctatccgcacgagttttccggcgggcaa
cggcagcgcatcgccatagcacgcgctttggcagtgtctccccaactgttggtctgcgac
gagcctaccagcgcactggatgtatcggtgcaggcgcagatattgaatctgctcaaatca
ctacaacaggagttggggctgagctatcttttcattacgcataatctagccgtggtggag
tatctcgcccaggaagtttgtgtgatgtatctggggcgcatcgtcgagcgcggtacgaca
gaagaggtcattcgctcccccaaacatccctatacgcaggctttgctttctgccgtgccg
cgtatggatgacagcggcagaaagtacgtcaggcttgagggagatatgccttcatccgct
aatccaccgcagggctgccatttcgcaccgcgttgcccgcaggcaatgagtgcctgcatg
atctatcccgaagctcgccgatgttcgaatacgcatagtttgagttgccatctgtatccc
gatccgacgtga
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