Sideroxydans lithotrophicus: Slit_2023
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Entry
Slit_2023 CDS
T01196
Name
(GenBank) OmpA domain protein transmembrane region-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slt02000
]
Slit_2023
Transporters [BR:
slt02000
]
Other transporters
Pores ion channels [TC:
1
]
Slit_2023
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Ortholog
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GFIT
Motif
Pfam:
OMP_b-brl
OmpA_membrane
DUF5777
OMP_b-brl_2
DUF6992
Motif
Other DBs
NCBI-ProteinID:
ADE12251
UniProt:
D5CTT9
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Position
2038405..2039016
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AA seq
203 aa
AA seq
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MKLKAKSSAVALALFAMTSSAMAEGFYVAVDGGAMGYSNSHILSAWGIDFNAGGAITLGG
GYNFNNYFGLEAGFTNTGDSTITTYGFYSKETLKSSAAQLAAVGTFPINDRFSMFLKAGV
ANTRIDYTYWSFGTTASASASKSHAMIGFGGQYNFNRHWGLRVQYQDYGKTQVGPVIANG
VPQAGTTGDIGMALFSVGGVYNF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaagcaaaatcatcggcagtggcactggctctgttcgccatgacctcttcg
gcaatggcagaaggcttttacgtagcggttgacggtggcgcaatgggttacagcaattcg
catatcctttcagcctggggtatcgacttcaacgcgggtggcgccatcaccttgggcggc
ggttacaacttcaataactatttcggcttggaagccgggttcaccaacaccggcgattcg
accatcaccacttacggtttttactcaaaagagacgttgaaatcttccgctgcacaattg
gctgctgtcgggaccttccctatcaacgatcgtttcagcatgttcctcaaagcgggagtg
gcgaataccaggatcgattacacgtattggtcgttcggcactaccgcttctgccagtgca
tcgaagtcccacgcaatgataggcttcggcggtcaatacaacttcaaccggcactggggc
ctgcgcgtccagtaccaggactatggcaagacccaggtggggccggtcatcgccaacggt
gtgccgcaagcgggaaccactggcgacatcggcatggcgttgttctcggtcggcggcgtg
tacaacttctga
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