Sideroxydans lithotrophicus: Slit_2045
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Entry
Slit_2045 CDS
T01196
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slt03032
]
Slit_2045
03036 Chromosome and associated proteins [BR:
slt03036
]
Slit_2045
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_2045
DNA replication proteins [BR:
slt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Slit_2045
Chromosome and associated proteins [BR:
slt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Slit_2045
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Slit_2045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
RHH_1
Motif
Other DBs
NCBI-ProteinID:
ADE12273
UniProt:
D5CTW1
LinkDB
All DBs
Position
complement(2062242..2062526)
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AA seq
94 aa
AA seq
DB search
MNRKELIDALAEKTGSSKADADRNIAALIDIVTATLKKGDNVALVGFGTFEVRKRAARTG
RNPATGAELKIKASKVPAFKAGATLKATVNGTKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaaagaactcatcgacgcattggcagaaaagactgggagcagcaaggctgac
gcagatcgcaatatcgctgcattgatcgacatcgttaccgcaacactcaagaaaggcgat
aacgtagctctggttggtttcgggacatttgaagtgcgcaagcgtgctgcacgaactggt
cgcaacccggcaacaggtgctgaacttaagatcaaagcatccaaagttcctgcattcaag
gctggtgcaacgctgaaggcaacagttaacggaacaaagaagtaa
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