Sideroxydans lithotrophicus: Slit_2087
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Entry
Slit_2087 CDS
T01196
Name
(GenBank) Neisseria PilC domain protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slt02044
]
Slit_2087
02035 Bacterial motility proteins [BR:
slt02035
]
Slit_2087
Secretion system [BR:
slt02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Slit_2087
Bacterial motility proteins [BR:
slt02035
]
Pilus system
Pilus assembly proteins
Slit_2087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
Motif
Other DBs
NCBI-ProteinID:
ADE12315
UniProt:
D5CU03
LinkDB
All DBs
Position
2104284..2109140
Genome browser
AA seq
1618 aa
AA seq
DB search
MKTFTRSIRFAGTALLFGTMLNAYSATTDLATAPLITSPTSSVLPNIFLMMDDSGSMAWD
YMPDNAGNFNAGTYGAASPQCNGMFYDHTITYTSPVDSTGASYANSSFTSAWNDGYNTTG
GSTDLSTSFRDPGGDPVQPAFYYKYTGTQTTEKLKDYYNSSSQFYLECNSKVTTATITFS
GTSSTTVTSVTVNGTTIAVNSTTSSSSTMASNVASAINASGTGYTATSSSSKVTIAGISP
ADVGTTPSVSVSTGTMSSTTTAFSTTTGSGVFTKVLVTSTSGPGATDERTNFANWWSYYH
TRILMMKTATGQAFSSLGTTFRVGFATINNNTGSDLLALNTFDATQKAAWYAKLYATRAN
NSTPLRQALADVGRMYAHKLPSTNSNNALTSSVPDPVQFSCQQNFTILTTDGFWNGPTPT
DLSGNAIGNQDYFEPRPMYDGANYSTTTVTPYTTVQTRQTVTTGQTTTYTFTYTVTSIGS
ACTTPSITVSHTVSSLTDNGKTIAVGIASTNPNTSRCHQLAANAWICRSSSNPFSGSSVT
DSTGTTWSLVNSFSGNTGCVSDRTAFGSGYSSSVGACQSKAGVGGSTVTTIPHSIVETAT
GYTATSVDQYTADQQTTQTTINGVVGPTSALTPSTLTYNFTGNLSYTSTVPTFTVGPDNA
GTPNSVCTATASLPVPDPTSWATTTPTGWGTWDTPPYTTSITGGTATTTIVSTVGPTAGT
PVVSSSNSGGTFNTLADVAEYYYITDLRTTALGNNLSGAPGAVNGTDISANNVPSSGLDA
AAHQHMTTFTLGLGARGNMVFDPSYESETAANGGGDFWDVRSGNTANGSTVCPWQASGSC
NWPVPASNSINNIDDLWHAAVDGRGTYFSAANPSDLATALSRALAGVSARTGSAAAATTS
NAFVTQGDNFLFRSTFVSQQWTGELIRQQLDVTTGAVLPAIDWSAQALLDANAARNIYFF
DASATNKLSSFTLANLTTAGLNSNFILPHIASLSQLCAVGATCLASWTPSTFYTAGDVYR
NGTTWYQVNTAYTSGATFGALDTTNSTVTSGIEGLNLVAFLKGDRTYEGASTDTLTGKYY
RQRNHVMGDIVSSESNYVKAALSPFYGDPGYKTGTSNFVTAMADRQAMVYVGGNDGMLHA
FYAATDMMSSTTGHVVSTGGINVNGGDEAWAFIPTAVIPNLYKLADKNYPLQHQYYVDGS
PVTADICISNCTSNTAAVWKTILVGGLNGGGTSYYALDITNPAHPIALWQFTDANMGYTY
GNPKVVKLKTGEWVVLFTSGYNNTAGDGQGYLYVVDAYTGTLVTSVNGTGIIGTGVGSVA
TPSGLGKLDAPLVSPGVDATATAVYAGDMLGNLWRFDINGDLGAAGYDAQLLATLQGPSP
AGNIQPITTKPLLSLVNNTVVIFVGTGRYLGSTDLSDTSQQSFYAIKDTYPAGTTPSVAI
FGNPRTQGTFVQQTQTSTTCPVGTAATICTSGQSVVVTSNNAVSFSSNGGWYFDFPLAGE
RVNVDPAIIDQTLVINSNVPNASSCSVGGDSFQYQLNYLTGGSVSSSPTGVIATKLGNEL
TTRPVVATLLDGTNKAYSQGSGGGTPNESSVWSNKGNNNNTTATGVPTRKSWRELIQQ
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttcacccgctcaatcagattcgccggcactgccctcctcttcgggaccatg
ctcaatgcatatagtgcgaccacggatcttgcaacggcgccgttgatcacttcgccaacc
tcatccgttctgcccaacatattcctcatgatggacgactcgggcagtatggcctgggat
tacatgcctgataacgctggcaatttcaatgccggcacctatggcgccgccagtccgcag
tgcaacggcatgttttatgaccataccatcacctacacgtcgcccgtcgattcgaccggt
gcctcgtatgcgaactccagcttcacttcggcctggaacgatggttataacaccaccggg
ggttcgaccgacctgagcaccagtttcagggatcccggcggcgacccggtgcaaccggct
ttttattacaaatataccggtacgcaaaccaccgaaaaactgaaggattattacaactca
agcagccagttttacctggaatgcaacagcaaggtaactaccgccaccattaccttcagt
ggtacttccagcaccactgttaccagcgtcaccgtgaacgggacgaccatcgcggtaaac
tccacgaccagcagcagcagcaccatggcgagcaacgtcgccagtgcaatcaatgcttcc
ggtacgggatacactgccaccagctcaagcagcaaagtgaccatagcaggcatatcacct
gcagatgttggcaccacgccaagcgtcagtgtcagcaccggtacaatgagttccaccaca
acagcattctcgaccacaacaggttccggcgtattcaccaaggtgcttgtgacctcgact
tccggtcccggggcgacggatgaacgcaccaatttcgccaactggtggagctattaccac
acgcgcatactgatgatgaagacggcaaccggtcaggcattcagttcgctgggcaccacg
ttccgcgtcggctttgccaccatcaacaacaataccggttcggatctcctggctctaaac
accttcgacgcgacacagaaagccgcctggtatgccaagctgtatgccaccagggcgaac
aacagtacccccctgcgccaggcgcttgctgatgtcggccgcatgtacgcgcacaagttg
ccctcaactaactcgaacaatgcgctaaccagcagcgtgccggatccagtccagttctcc
tgtcagcagaacttcaccatcctgacaaccgatggtttctggaacggccctaccccaacc
gatctgtccggcaatgccatcggcaaccaggattatttcgagccaaggccgatgtacgac
ggcgctaactattccaccacgaccgtgacaccgtacacgactgtgcagaccaggcagacc
gtcaccacgggacaaaccaccacatacaccttcacttatacagtcacatcgataggttct
gcgtgtacaacgccaagcatcacggtatcccatacggtcagctcattgactgacaacggc
aaaacgattgccgtaggcatcgccagcaccaatccgaacacttcgcgctgccaccaactg
gccgccaatgcctggatatgcagaagcagtagcaatcctttttccgggtcatccgtcact
gactcgaccgggacgacgtggagtctggtcaacagtttttccggcaacaccggctgcgtc
agcgatcgcactgcattcggcagcggctacagttcttccgtgggagcctgccagagcaaa
gctggtgtcggcggttccaccgtcaccaccataccgcactcgatcgtagaaaccgcaacc
ggttatacggcaacctcggttgaccagtacaccgccgaccagcaaacgacccaaaccacc
atcaacggggtggtcggcccgaccagcgcactgacgccatcgacgctgacgtacaacttc
accggcaacctgagttatacctccacggttcccacctttaccgtgggccccgataatgca
ggtacgccgaacagcgtatgcacggccactgcctcgcttcctgttccggatccgacgtca
tgggccacgaccactccaaccggctggggaacatgggacacgccgccgtatacaacctcc
atcaccgggggaacagctaccaccaccatagtcagcacggtaggcccgactgcgggtacg
cctgtcgtctcttcatcaaacagtgggggcactttcaacacactggctgacgtcgccgag
tattactacatcaccgatctgcgcaccaccgcgctgggcaacaacctttccggcgctccg
ggcgcggtgaacggcacagacatcagcgccaacaatgtgccgtcgagcggcctggatgct
gcagcgcatcagcacatgaccacatttactcttggtctcggtgcacgcggaaacatggta
ttcgaccccagttacgaatccgagactgccgccaacggcggcggcgatttctgggatgtc
aggagcggcaacaccgccaacggatcgaccgtctgtccttggcaagccagcggaagctgc
aactggccggttccggcttccaactccatcaataacatcgatgacttgtggcatgccgct
gtagacgggcgcggcacctacttcagcgctgccaacccctccgacctggcaaccgccctt
tccagagccctggcaggcgtatccgcccgcaccggctcggcagcggcagccacgaccagt
aatgcgttcgtgactcagggtgacaacttcctgttccgttcgaccttcgtctcgcaacaa
tggacgggcgaactgatacgccagcaactggatgtcaccaccggcgcagtccttcctgcc
atcgactggtcagcgcaggctctgctggatgccaatgccgcgcgcaacatctatttcttc
gatgcaagtgcgaccaacaaactgtcgtctttcacgctggctaatctgaccacagctggt
ctgaacagcaatttcatcctgccgcatatcgcatcgctcagccaactgtgtgcggtcgga
gccacttgcctggctagctggacacccagcaccttctatacggcaggcgatgtatatcgg
aacggcacgacctggtaccaagtcaatacggcatacacatcaggagccacctttggtgcc
cttgataccaccaatagcaccgtgacgtcaggcatcgagggactcaacctggtggccttc
ctcaagggagaccgcacctacgagggtgcgtccaccgacaccctcactggcaaatactat
cgccagcgcaaccatgtgatgggtgacatcgtgagctccgaatccaactatgtgaaagct
gccctgtcaccgttctatggtgaccccggttacaagactggcaccagcaacttcgtcact
gccatggcggacaggcaagccatggtgtatgtcggcggcaacgacggcatgttgcatgca
ttctatgcagcaacagacatgatgagcagcacgacaggtcatgtcgtctcgaccgggggc
atcaacgtgaatggcggcgacgaggcgtgggccttcattcccactgcggtcattcccaac
ctctacaagcttgccgacaagaattaccctctccagcaccaatattacgtggacggttcg
ccagtcactgccgatatctgcataagcaattgcaccagcaacactgctgccgtctggaaa
acgatactggtaggtggactgaatggcggcggcacaagctactatgcgctggacatcacc
aatccggcccaccccatcgcattgtggcagttcacagatgccaacatgggatacacctat
ggcaaccccaaggttgtcaaattgaagaccggggaatgggtggtgttgttcacctcgggt
tataacaataccgctggcgatggacaaggttacctgtatgtggtcgatgcctacaccggc
acactggtcacctcggtcaacggcacgggcatcatcggcaccggcgttggcagcgtggca
acgcccagcggcctcggcaaactcgatgctccgttggtctctcccggtgtcgatgcaact
gccacggcagtctacgccggagacatgctcggcaacctgtggcgattcgatatcaacggc
gatcttggtgctgcaggatatgacgctcagctgttggccacgctgcaaggtccttcccct
gccggcaacatacaaccgatcacgaccaagccgttattgtccctggtcaataacactgtt
gtgatttttgtaggcacaggtcgctacctgggctccacggacctgagcgataccagccaa
cagtccttctatgccatcaaggacacttacccggccggtacgacacccagtgtcgcgatc
tttggcaacccgagaacgcagggcacattcgtgcagcagacgcaaacttcgacgacctgc
cctgtaggaactgctgcgacgatctgtacctcgggccaaagcgtggtcgtcaccagcaac
aatgccgtaagtttctccagcaatggaggctggtacttcgacttcccgctggcgggagag
cgagtgaatgtcgaccctgcgatcatcgatcagacattggtcatcaactccaacgtaccc
aatgccagttcctgctccgtgggcggcgacagcttccagtatcaattgaattacctgact
ggcggttcagtctcctcgtcacccacaggggtcatcgcgacaaaactcggcaacgagctg
accacgcgcccggtggttgcgacactgctggatggcactaacaaggcttactcacagggt
tcaggcggcggcacacctaacgaaagctctgtctggagcaacaagggcaataacaacaat
acgactgccacaggagttcccacccgtaaatcctggcgagaactgatccagcagtaa
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integrated database retrieval system
