Sideroxydans lithotrophicus: Slit_2118
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Entry
Slit_2118 CDS
T01196
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slt03016
]
Slit_2118
Enzymes [BR:
slt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Slit_2118
Transfer RNA biogenesis [BR:
slt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Slit_2118
Prokaryotic type
Slit_2118
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3104
Motif
Other DBs
NCBI-ProteinID:
ADE12346
UniProt:
D5CUF9
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All DBs
Position
complement(2145273..2146037)
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AA seq
254 aa
AA seq
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MRIALGIEYDGSGYNGWQSQPDVPNIQDTLQAALSRIAGENISIIAAGRTDTGVHALEQV
VHFDTGIVRPLASWVRGTNALLPKDVAVLWAHPVADEFHARFSAQARSYQYVLINRPSRS
AVHHGKVGWFHLPLDVEAMRMAAQNLLGEHDFSAFRSSQCQAKTPVKTLAQLDIVQQGDI
IIFNLTANAFLHHMVRNIVGCLLYVGKGKYPPQWMHELLQGRERKLAAPTFAPDGLYLCH
ITYDAKWGLPQGRG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagcgcttggcatcgaatacgacggcagcggctacaacggctggcaaagccag
ccggacgtgcccaatattcaggacacattgcaagcggcgttgagcaggatcgcaggcgaa
aatatctccatcattgccgcaggaaggaccgatactggcgttcatgcactggaacaggtt
gtgcatttcgataccggcatcgtcaggccgctcgcctcgtgggtgcggggcacgaatgcc
ttgttgccgaaagatgttgccgtgctgtgggcgcatcccgttgccgatgagttccatgcg
cgtttctcggcacaggcacgcagctatcagtatgtgctcatcaaccggccttcgcggagc
gcggtccatcacggcaaggtgggctggttccacttgccgctggacgtggaggcgatgcgg
atggcagcgcaaaacctgctgggtgaacacgacttcagcgccttccgttcctcacagtgt
caggccaagaccccggtgaagacactggcgcaactcgacatcgtgcaacagggcgatatc
atcattttcaacctgacggcaaacgccttcctccaccacatggtgcgcaatatcgtcggt
tgtctgttgtacgttggcaagggaaagtacccgccgcagtggatgcatgaactgctacag
gggcgcgagcgcaaactggcagcaccgacctttgcgccggatggtttgtatttgtgccat
atcacttacgatgcaaaatggggtttgccgcaaggacgtggttga
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