Sideroxydans lithotrophicus: Slit_2227
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Entry
Slit_2227 CDS
T01196
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Slit_2227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_2227
Enzymes [BR:
slt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Slit_2227
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Slit_2227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Uma2
Motif
Other DBs
NCBI-ProteinID:
ADE12455
UniProt:
D5CUR8
LinkDB
All DBs
Position
complement(2261093..2261830)
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AA seq
245 aa
AA seq
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MNIRDETVLRELNLYPLWVRRGVPAEADVASLPAAHAETSQPALPVAEQPMLRQQTEPPP
ASTLNWTDLKRVVRDCSACKLRSGCTQTVFGVGDEKAEWLFVGEGPGADEDAQGEPFVGQ
AGKLLDNMLAALRLKRGDKVYIANIVKCRPPNNRTPEPDEIATCMPYLQQQIELIKPKLI
VALGKTAATSLLGRDATLGSLRGTVHDYHGTPLIVTYHPAYLLRSPAEKAKAWQDLCFAR
QRMLP
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattcgagacgagaccgttctgcgcgaactcaatctttacccgttatgggtgcgg
cgcggcgtacctgcagaggccgatgttgcgtctttgcccgcagctcatgccgagacgtcg
caaccagctttaccggttgccgagcagccgatgttgcggcaacagactgagccccccccg
gcgtcaacattgaattggaccgacctcaagcgggtggtgcgcgactgcagcgcctgcaaa
ctgcgctccggctgcacgcagaccgtgttcggcgtgggcgacgaaaaggctgaatggctg
ttcgtcggcgaggggccgggtgcagacgaagatgctcaaggcgaaccgttcgtggggcag
gccggcaagctgctcgacaacatgctggcggcgctcaggctgaagcgcggcgataaggtc
tacatcgccaatatcgtcaaatgccgcccgcccaacaaccgcacgccggagccggacgag
atcgccacctgcatgccgtatctgcagcagcagatcgaactgatcaagcccaaactcatc
gtggcgctgggcaagaccgcggcgacgtctttgctcgggcgcgatgcaacgctcggctcg
ctgcgcggcaccgtgcatgactaccacggtacgccgcttatcgtcacctatcaccccgct
tatctgctgcgcagtccggccgagaaagccaaggcctggcaggacctgtgcttcgcccga
cagaggatgctgccgtga
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