KEGG   Sideroxydans lithotrophicus: Slit_2435
Entry
Slit_2435         CDS       T01196                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
slt  Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:slt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:slt02048]
    Slit_2435
Enzymes [BR:slt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Slit_2435
Prokaryotic defense system [BR:slt02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Slit_2435
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII T1R_D3-like DEAD LTN1_E3_ligase_6th HSDR_N_2 FBA DUF4080
Other DBs
NCBI-ProteinID: ADE12660
UniProt: D5CMI8
LinkDB
Position
complement(2459306..2462548)
AA seq 1080 aa
MPNFISEDQIEQALVQKLQHQHGFDALDCFTENAEDLNDGSGRANKRDVILVERVREAAI
RLNPDIPATAIEDALDKLLDRRQAMTLIAANREIYGLLRDGIPVEFDNAQGVRQQEQVRL
LDFNPATQDNNRYLAVTQLWIKGERGFRRPDVLLYVNGIPLVFIELKNSNVKLRNAYDDN
LTTYKAEIPQLFLTNAFCVLSNAIETKVGSITAEWEHFFNWLRADDEKQKIDRAAIREQG
ISLEGVIEGLLPKRRLLDYVENFILYYKDSSKIIAQNHQFIGVNRAYEAFLKREELAGKL
GVFWHTQGSGKSFSMIFYARKIFRKQTGNFTFVVVTDRDDLDGQIYRNFLNTRTVSEAEA
AQPKNSEEMRKFLGQNKRLVFTLIQKFRWDKGREYPELSGRNDIIVIVDEAHRTQYKTFA
ENMRKGLPKAQYIAFTGTPLLKRVGGVQKTNAWFGGYVSEYNFQQSMDDGATVPLFYEKR
VPEVLIQNDDLSEEFYEILEDENLDEAQQAKLERRFSKEVEVIKRDGRLETIAQDIVYHF
PRRGYLGKGLVVSVDKYTAVKMYDKVQRLWKEEIKNLLGRISKSANDIEKVRLKQIVEYM
RSVEMAVVISEDADEEKKFAEQELNIKPHRERMNKLDKHSHDIEYNFKDPEDSLQLVFVC
AMWLTGFDAPTLSTLYLDKPMQGHTLMQTIARANRVTSWKINGVEKRNGEIVDYYNVFRN
MKQALKDYAQGGVEVDSPVQEKAMLFRLLDDAIEQGLAFCHEKGVPLREVLGSADVFEKL
GRFNVFADSLLANDEWRKGFNVYENTITSLYEACKPEVLGHGKGREVAAFQYLRGVIDSL
IEQKDIDAISLKIANLLDESVVVNDAEAFKARQYNAEYQIIQKGRTWDLSKINFDKLREE
FKQAVHKNIEIADLRAFLQHKLELMLQQNATRTDFAQRLQEIIDKYNSGGSSTENSYEEL
MKYAEDLRAEEERHIREGLTDDELELFDLLKKDKMTQEETQKVKLAAKSLLHRLLEEQPK
VLVQDWYKDSQTQKQVRSTVEKVLDSELPDSYDRVLFREKCDNVFHLMLDYASHHRKWAA
NT seq 3243 nt   +upstreamnt  +downstreamnt
atgcctaacttcatttccgaagatcagatcgagcaggcgctggtgcaaaagctccagcat
cagcacggcttcgatgcgctcgactgctttacggaaaatgcggaagacttgaacgatggc
tcgggccgagccaacaagcgcgatgtgattctagtggaaagggtgcgcgaggctgcgatt
cgtctgaacccggacattcccgctaccgcgattgaggatgcgctagataagctgctcgac
cgtcggcaggcgatgacgttgatcgccgcgaaccgggaaatctatggtctgttgcgcgat
ggcattccggtggaattcgacaacgcgcagggggtgcggcagcaggagcaagtgcgtctg
ctggatttcaatccggcgactcaagacaacaaccgctacctagccgtcacccagctctgg
atcaagggcgagcgcggtttccgccgcccggatgtgttgctctacgtcaacggcattccg
ctggtgttcatcgagctgaaaaactcgaacgtgaagttgcgcaacgcctacgacgataac
ctgacgacttacaaggcggagattccgcagcttttcctgaccaacgctttttgcgtgctg
tccaatgccatcgagaccaaggtgggcagcatcacggcggagtgggagcatttcttcaac
tggctgcgcgcggatgacgagaagcagaagatcgaccgcgccgcgatccgcgagcagggc
ataagcctggaaggtgtgatcgaaggtttgctgcccaagcgcaggctgctggactacgtg
gagaatttcattctctactacaaggatagttcgaagatcatcgcgcagaaccaccagttc
atcggcgtgaaccgggcttatgaagccttccttaaacgagaggagctggcgggcaagctg
ggtgtgttctggcacacgcagggctcgggcaagagcttctcgatgattttttatgcgcgc
aagattttccgaaaacagaccggcaatttcacctttgtggtggtgaccgaccgcgatgat
ctggatgggcagatttatcgcaacttcctgaacacgcgcacggtcagcgaggccgaagcc
gcgcagcccaagaacagcgaggagatgcgcaagtttcttgggcagaacaagcggctggtg
ttcaccctgatccagaaattccgctgggacaaaggccgcgagtatcccgagctatccggg
cgcaacgacatcatcgtgatcgtggacgaggcgcaccgcacgcaatacaagacctttgca
gagaacatgcgcaaggggttgcccaaggcgcaatacattgcttttaccggcacgccgctg
ctgaagcgcgtgggcggtgtacagaagaccaatgcgtggttcggcggttatgtttcggaa
tacaacttccagcagtccatggatgacggcgcgacggtgccgctgttttacgaaaagcgc
gtgccggaagtactgattcagaacgacgatctgagtgaggagttttacgagattctggaa
gatgagaatctggacgaggcgcaacaagccaagctggaaaggcggttctcaaaagaggtt
gaggtcatcaaacgtgatggccgcctggagaccattgcgcaggatattgtgtatcacttt
ccacggcgcggttatttgggcaaagggctggtggtgtcggtggataagtacaccgccgtg
aaaatgtacgacaaggtgcagcggctgtggaaagaagaaatcaagaacttgctcgggcgc
atcagcaaatcggctaacgatattgagaaggtccggttgaagcagattgtcgagtacatg
cgctcggtggaaatggcggtggtgatcagcgaggacgcagacgaggagaaaaagtttgcc
gagcaggagctgaatatcaagccgcatcgcgagcgcatgaacaagctggataaacacagc
catgatatcgaatacaacttcaaagacccggaggattcgctgcaattggtgttcgtttgt
gcgatgtggctgacgggctttgatgcacccacactttcaacgctatacctcgacaagccg
atgcagggacataccctgatgcaaaccattgcccgcgccaaccgcgttacctcctggaag
atcaacggggtggagaagcgcaacggcgagatcgtggattactataacgtgttccgcaac
atgaagcaggcgctgaaggattacgcgcaagggggcgttgaggttgattcaccggtgcag
gaaaaggcaatgctgttccgcttgctggatgatgcgattgagcagggcttggcgttctgc
catgagaagggcgttcccttgcgtgaagtgctgggcagtgcggatgtgttcgagaaactt
ggccgctttaatgtatttgccgattccttgttggcgaacgacgaatggcgcaagggtttt
aacgtgtatgagaacaccatcacctcgttgtatgaggcgtgcaagccggaagttctcggg
cacggcaaggggcgcgaggtggcggcgttccaatacctgcgcggggtgatcgacagcctt
atcgaacaaaaggacatcgacgcgatcagcctgaagatagccaatctgctggatgaaagc
gttgtggtgaacgacgcagaggcattcaaagcgcggcaatacaacgcggaataccagatc
attcagaagggcaggacctgggatctcagcaagatcaacttcgacaaactgcgagaggag
tttaagcaggcagtccacaagaacattgaaattgccgacctgcgcgccttcctgcaacac
aagctggaactgatgctgcaacaaaatgcgacgcgcaccgactttgcgcagcgcttgcag
gagattatcgacaaatacaattcgggcggatcatctacggaaaattcatatgaagagctg
atgaagtacgccgaagatttgcgtgccgaagaagagcggcacatccgcgaggggctgacg
gacgacgaactggaacttttcgacctgttgaagaaggacaagatgacgcaggaggaaacg
caaaaagtgaagcttgcggccaagtcactgctgcatcgcctgctggaggagcaacccaag
gtgctggtgcaggattggtacaaggattcgcagacccagaagcaagtgcgctctacagtg
gagaaagtgctggatagcgaacttccggatagctacgaccgtgtgctgttcagggagaag
tgcgacaacgtgtttcacttgatgcttgattatgcgagtcatcataggaagtgggcggct
tga

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