Sideroxydans lithotrophicus: Slit_2503
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Entry
Slit_2503 CDS
T01196
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt03030
DNA replication
slt03430
Mismatch repair
slt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Slit_2503
03430 Mismatch repair
Slit_2503
03440 Homologous recombination
Slit_2503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slt03032
]
Slit_2503
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_2503
Enzymes [BR:
slt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Slit_2503
DNA replication proteins [BR:
slt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Slit_2503
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Slit_2503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DciA
Motif
Other DBs
NCBI-ProteinID:
ADE12728
UniProt:
D5CN31
LinkDB
All DBs
Position
complement(2533273..2533980)
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AA seq
235 aa
AA seq
DB search
MKKLLQRWFSAGPRLRPHQKARLDAWRAIPANLGPVTFEHSRVVVVDVETTGLNLITDTL
ISIGAVAVVNGRIALGDSFSVVLKQQESSDKENILVHGISSTAQRDGVDPVEALLTFLEY
LGKSRLIAFHVAFDETMIRRAMRQYLGLSFKHEWLDLAYVMPALNRSLMENHRVLDDWIG
RFNIHIEARHNALADALATAQLFQIAISQARNKNINDFEGLYDLEKSHRWLRDVS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagttgctgcaacgctggttttctgccgggccacgcctgaggccacatcagaag
gcacgcctggatgcgtggcgggcgataccggcgaacttggggccggtgacttttgagcat
tctcgtgtcgtggtggtagacgtggaaacgaccggccttaacctgatcaccgatacgctg
atctccatcggcgcggtggcggtggtgaacggacgtatcgccttgggggacagcttttcc
gtagtgttgaagcagcaggagagcagcgacaaggaaaatatactggtgcatggcatctcc
agtaccgctcagcgcgacggagtcgatccggtagaggcattgctgacctttcttgaatat
ctgggcaaatcccggctgatcgctttccatgtcgctttcgatgaaaccatgattcggcgg
gccatgcgccaatacctggggctctcgttcaaacatgagtggctggatctggcttatgtg
atgcccgccctgaatcgttcgctgatggaaaatcatcgggtactggatgactggatcggg
cgcttcaatatccatatcgaggccaggcataacgcgttggccgatgcgttggctactgcc
caactgtttcaaatcgccatctcgcaagcacgcaataaaaacatcaatgatttcgagggt
ttgtatgaccttgagaagtcacaccgctggctgcgcgatgtaagctga
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