Sideroxydans lithotrophicus: Slit_2576
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Entry
Slit_2576 CDS
T01196
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Slit_2576
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slt01007
]
Slit_2576
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slt03016
]
Slit_2576
Enzymes [BR:
slt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Slit_2576
Amino acid related enzymes [BR:
slt01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Slit_2576
Transfer RNA biogenesis [BR:
slt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Slit_2576
Prokaryotic type
Slit_2576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Dor1
DUF2981
Motif
Other DBs
NCBI-ProteinID:
ADE12801
UniProt:
D5CNA4
LinkDB
All DBs
Position
complement(2617291..2618628)
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AA seq
445 aa
AA seq
DB search
MLDIQTLRNDLAGVAARLATRGYTLDTAKFEQLEAERKTIQTRTQELQAKRNASSKLIGQ
AKAKGEDTTAIMAEVGALGEELKRYEAVLPQLLQEMDAFLAEIPNVPHATVPEGKSEANN
LEVRKVGEIPKFAFEVKDHVSIGEGLGGLDFETATKIAGARFSLLKGPLARLHRALAQFM
LDTHTEQHGYTETYVPYLVNADSMRGTGQLPKFEADLFRVTARPSANRLTALIHPEATQF
EEVGDFYLIPTAEVPVTNMVRDEIVPLEKLPLKFVAHTPCFRSEAGSYGRDTRGMIRQHQ
FDKVELVQIVHPEKSYEALEGLLGHAETILKLLGLPYRVVKLCTGDMGFSAATTYDIEVW
LPAQNTYREISSCSNFEAFQARRMQARFRNAAGKPELVHTLNGSGLAVGRTLVAILENYQ
QADGSVKVPEALRPYMGGLTSINAS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctagacatacaaacattacgcaacgatctggctggagtggctgcacgcctggcgacc
cgcggctacacgttggacacggcgaagttcgagcagctggaggccgagcgcaagaccatc
cagacgcgcacgcaggagctgcaagccaagcgcaatgcgagttccaagctgatcggccag
gccaaggccaaaggtgaagacaccacggcaatcatggccgaggtcggcgcgctgggcgag
gaactgaagaggtacgaagcagtattgccgcaactgctgcaggagatggatgcgttcttg
gcagaaattccgaacgtgccgcatgcgaccgtgccggagggaaagtccgaggccaataac
ctcgaggtgcggaaggtcggcgagatccctaagttcgcctttgaagtaaaagatcacgtg
agcatcggcgaaggattgggaggactggatttcgagacggccaccaagatcgccggcgcg
cgcttctccttgctgaaagggccgctggccagactgcaccgtgcactcgcccaattcatg
ctggatacgcataccgagcaacacggctataccgagacctatgtaccctacttggtgaac
gccgattcgatgcgaggaactggccaattgccgaaatttgaggccgatttatttcgagtg
actgcgagaccatctgcaaatcgactgactgcactgattcatcctgaagctactcagttt
gaagaagttggggatttctacctcattcccaccgccgaagtccctgtcaccaacatggtg
cgcgacgagatcgtgccgctggaaaaactgccgctgaagttcgtggcgcacacgccgtgc
ttccgcagcgaagccggttcatacggccgcgacacgcgcggcatgatccgccagcaccag
ttcgacaaagtggaactggtgcagatcgtccaccccgaaaaatcctatgaagcgctggaa
ggtctgctcggccacgccgagaccatcctcaagctgctcggcctgccgtatcgcgtggtc
aagctgtgcaccggcgacatgggcttctcagccgccaccacctacgacatcgaagtgtgg
ctgccggcgcagaacacttaccgcgagatatcgtcctgctccaacttcgaggcgttccag
gcacggcgcatgcaggcgcgcttccgcaatgcggcgggtaagccggagctggtgcatacc
ctcaatggctccggcctcgcggtcggccgcacgctggtcgccatccttgagaattatcag
caggccgatggcagcgtgaaggtgccggaagcgctgcgtccgtacatgggcgggctgacc
tcaatcaacgccagctga
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