Sideroxydans lithotrophicus: Slit_2716
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Entry
Slit_2716 CDS
T01196
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00470
D-Amino acid metabolism
slt00550
Peptidoglycan biosynthesis
slt01100
Metabolic pathways
slt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Slit_2716
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Slit_2716
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Slit_2716
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slt01011
]
Slit_2716
Enzymes [BR:
slt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Slit_2716
Peptidoglycan biosynthesis and degradation proteins [BR:
slt01011
]
Precursor biosynthesis
Amino acid ligase
Slit_2716
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
Neuropep_like
Motif
Other DBs
NCBI-ProteinID:
ADE12941
UniProt:
D5CP20
LinkDB
All DBs
Position
complement(2746468..2747397)
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AA seq
309 aa
AA seq
DB search
MDKSIPTSFGKVAVLFGGRSAEREVSLKSGAAVLAALLKSGVDAHAFDPAQRDLSELKKE
KFDRVFIILHGRYGEDGTVQGALELMDIPYTGSGVMASAIAMDKWRTKLVWQAAGLPIPE
YEALTAPSDWNAVADHLDLPLFVKPSSEGSSVGVTKVKTVDELPIAYAEAAKYDKVVIAE
SFMSGGEYTATILNGRALPVIKIEPANEFYDYEAKYLRDDTRYLCPCGLSVEQEAEMQHL
ALLAFQLIGCQGWGRVDFLRGDDGKFYLLEINTAPGMTDHSLVPMAARQAGISFEQLVVQ
ILEGAGIGK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggataagagcatccctacctcttttggcaaagtcgcagtgctgttcggcgggcgttcg
gcagagcgcgaggtgtcgttgaagagcggcgcagcagtgctggccgcattactgaaaagc
ggtgtggatgcacatgccttcgatccggcacagcgcgacctgtccgaactcaaaaaggaa
aagttcgaccgcgtattcatcatcctgcatggtcgttacggggaggatggcacggtgcag
ggcgcgctggaactgatggatattccttacaccggcagcggtgtgatggcttcggccatt
gcgatggacaagtggcgcaccaagctggtttggcaggcggcggggctgcctatccccgaa
tacgaggcgctgaccgcgccctccgactggaacgcagtggccgatcatctcgacctgcct
ttgttcgtgaaaccttccagcgagggcagcagtgtcggtgtgaccaaggtgaagacggtg
gatgagttgcccattgcgtatgcagaggcagcgaagtacgacaaggtggtgatcgccgag
agcttcatgagcggcggcgagtacaccgcgacgatcctgaatggccgcgccctgccggta
atcaagatcgaaccggcgaacgagttctacgactatgaagccaagtacttgcgcgatgac
acgcgctatctgtgcccgtgcggattaagcgtggaacaggaagccgagatgcagcatctg
gcgttgctcgcgttccagctcatcggttgccagggttgggggcgtgtcgacttcctgcgc
ggcgacgacggcaaattctacctgctggagatcaatactgcgccgggcatgaccgaccat
agcctggtaccgatggcggcccgccaggcgggtatcagtttcgagcaactcgtggtgcag
attctggagggggcaggaattgggaaatag
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