Sideroxydans lithotrophicus: Slit_2833
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Entry
Slit_2833 CDS
T01196
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt03030
DNA replication
slt03410
Base excision repair
slt03420
Nucleotide excision repair
slt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Slit_2833
03410 Base excision repair
Slit_2833
03420 Nucleotide excision repair
Slit_2833
03440 Homologous recombination
Slit_2833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slt03032
]
Slit_2833
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_2833
Enzymes [BR:
slt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Slit_2833
DNA replication proteins [BR:
slt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Slit_2833
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Slit_2833
NER (nucleotide excision repair)
GGR (global genome repair) factors
Slit_2833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ADE13058
UniProt:
D5CPR3
LinkDB
All DBs
Position
complement(2849411..2852200)
Genome browser
AA seq
929 aa
AA seq
DB search
MKTLLLVDGSSYLYRAFHAMPDLRSPQGEPTGAIYGVLNMLRRLRADYPADYSACVFDAK
GKTFRDDWYPEYKAHRPPMPDDLRAQIEPLHEVVAAAGWNILMVDGVEADDVIGTLTHQA
SSNGAHCIVSTGDKDLTQLVNPHVMLVNTMSNEVLDEAGVLAKFGVEPARIVDYLALVGD
TVDNVPGVAKCGPKTAVKWLTQYGTLDNLLAHADEVGGAVGENLRAARDWLPQGRRLVTV
KCDVALDRKFDELSAPAADIEKMKALFERFGFKSWLREVSYPSPASGRGAGGEGRSGDAS
SSLTPTLSQGARGQEQRQFEQPALPSTTNDTSNYQTILTDAQLDAWLHKLMAAPLVSLDT
ETTGLDGMTAQLVGISFSIEAHQAAYLPLAHHYPGAPDQLGREHALQKLKHWLESPAHKK
LGQNLKYDQHIFANHGIAFAGIAEDTLLQSYVLESHKPHEMGNLALRHLGLSTVSYADVV
GKGAKQIGFDQVDLETATRYAAEDADITLQLHQTLSPQLQGRLDAVYRQIELPVREVLFK
MERNGVLIDSAMLGRQSHELGLKLNEIEKQAFEAAGQPFNLNSPKQLSEILFDKLQLPVK
KKTPSGTPSTDEEVLQELALDYPLPKLLLEYRGMAKLKSTYTDKLPQMVNAKTGRVHTSY
AQAVAVTGRLASSDPNLQNIPIRTPEGRRIREAFITPAGSRIVSADYSQIELRIMAHLSG
DEGLLKAFAAGEDIHRATAAEVFSVALDAVSSEQRRYAKVINFGLIYGMSAYGLAAQLNI
ETSAAKQYIDLYFARYPGVKRYMDSTREQAKAQGFVETWFGRRLWLPEINGANGMRRQAA
ERAAINAPMQGTAADLIKLAMIAVQDWLETEKLATKLIMQVHDELVLEVPQGELARVKDK
VRELMCNVAELKVPLEVGMGEGGNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaagactctgttgttggtggatggctcgtcctatttatatcgcgcttttcatgccatg
ccggatctgcgcagcccacagggcgaacctactggcgcgatctacggcgttctgaacatg
ctgcgccgcttgcgtgccgactacccggcagattatagcgcctgcgtgttcgatgcgaag
ggcaaaacgttccgcgacgactggtatccggaatacaaggcgcatcgtccgccgatgccg
gacgatctgcgcgcgcagatcgagcccctgcatgaagtcgtcgcggcggcgggctggaac
atcctgatggtggatggcgtggaagccgacgatgtcatcggcaccctgactcatcaggca
tcgagcaacggcgcgcactgcatcgtctccaccggcgacaaggacctcactcagctggtc
aatccgcatgtcatgctggtcaacaccatgagcaacgaagtgctggacgaagcgggcgtg
ctggccaagttcggcgtggagcctgcacgcatcgtggattatctggcactggtcggcgac
acggtggacaacgtgcccggtgtggccaagtgcggccccaagaccgcggtgaaatggctc
acccagtacggcacgctggacaacctgttggcgcacgcggatgaagtgggcggtgcggtc
ggcgagaacctgcgtgcggccagagactggctgccgcaggggcgccgtctggtcacggtg
aaatgcgacgtggcgctggacaggaagttcgacgaactgtccgcacctgcggccgacatc
gaaaagatgaaagcgttgttcgaacgcttcggcttcaaatcctggctgcgtgaagtttct
tacccctcgcccgcaagcgggagaggggctgggggtgagggtcgttccggtgacgcatca
tcgtccctcaccccaaccctctcccagggggcgagggggcaagagcagcgccagttcgaa
cagccggcgttgccttcgaccaccaacgacacctcgaattaccaaaccatcctcaccgat
gcccagctcgatgcctggctgcacaagctgatggcggcaccgctggtgagcctcgacacc
gagaccaccggactcgacgggatgaccgcgcaactggtcggcatctcgttcagcatcgaa
gcacatcaggccgcctacctgccgctggcgcaccattatccaggtgcgccggaccagctt
ggacgcgagcatgcgctgcagaagctcaaacactggctggaaagcccggcccacaagaag
ctggggcagaacctcaaatacgaccagcacatcttcgccaaccacggcatcgctttcgcc
ggcatcgccgaagacacgctgctgcaatcctatgtgctggaatcgcacaagccgcacgag
atgggcaacctggcgttgcgtcatctggggctgtcgacggtcagctatgccgatgtggtg
ggcaagggcgccaagcagatcggcttcgatcaggtcgacctcgagactgccactcgctat
gcggcggaagacgccgacatcacgctgcagctgcaccagacattgtcgcctcagctgcaa
ggccgtctggatgcggtctacaggcaaatcgaattgcccgtgcgcgaggtgctgttcaag
atggagcgcaacggcgtgctgatcgacagcgccatgctggggcggcagagccacgagctg
gggctgaaactgaacgagatcgagaaacaggcgttcgaagcggcgggacagccgttcaac
ctcaactcgcccaagcaactcagcgagatcctgttcgacaagctgcaattgccggtgaag
aaaaaaacgccgagcggcacaccctccaccgacgaagaagtgctgcaggagttggcgctc
gattacccgctgccgaaactgctgctcgaatatcgcggcatggcaaaactcaaatccacc
tacaccgacaagctgccgcagatggtgaacgccaaaaccgggcgtgtgcacaccagctac
gcgcaggccgtggcggtgaccgggcgcctggcctccagcgaccccaacctgcagaacatc
ccgatccgcacgccggaaggccgccgcatccgcgaagcgttcatcacacccgccggttct
cgcatcgtctccgccgactattcgcagatcgagctgcgcatcatggcgcacctctccggc
gacgaagggctgctcaaggccttcgccgccggcgaagacatccaccgcgccaccgccgcc
gaagtgttcagcgtggcactcgatgccgtgagcagcgagcagcgccgctatgccaaggtc
atcaatttcggattgatctacggcatgtccgcttatggcctggctgcgcaactcaatatc
gagaccagcgccgccaagcaatacatcgacctctacttcgcgcgttaccccggcgtgaag
cgctacatggacagcacgcgcgagcaggccaaggcgcagggtttcgtcgagacctggttc
gggcgcaggctgtggttgcccgagatcaacggtgcgaatggaatgagaagacaagctgcc
gaacgcgctgccatcaacgcgccgatgcaaggtaccgccgccgacctgatcaagctggcg
atgatcgcggtgcaggattggctggaaacagagaagttggcaaccaaactcatcatgcag
gtgcatgacgaactggtgctggaagtgccgcagggggaattggctcgcgtgaaagataag
gtgcgggagttgatgtgcaatgtggcggagttgaaggtgccgctggaagtggggatgggg
gagggcgggaattgggatgaggcgcattag
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