Sideroxydans lithotrophicus: Slit_2875
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Entry
Slit_2875 CDS
T01196
Name
(GenBank) O-antigen polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00540
Lipopolysaccharide biosynthesis
slt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Slit_2875
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
slt01005
]
Slit_2875
Enzymes [BR:
slt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
Slit_2875
Lipopolysaccharide biosynthesis proteins [BR:
slt01005
]
Core region
Slit_2875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
ADE13100
UniProt:
D5CQ79
LinkDB
All DBs
Position
complement(2891386..2892663)
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AA seq
425 aa
AA seq
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MKSVQQRYLSIVELSATVLLLAYPTAMIAVKGGMNGVFLLMLLLALAVWLARPNGIEAVM
WRSEFTIYTVSMCAMSVAILISQTYLQNYTAHPYDAASRYWLAIPVFLLLQRLRPAVFVV
LQVAFPLAAIIGFMMSNDLGAGSENRSGIGTLDLIHFGDLELIFGVLSLFSINWLGRDNK
LLRLLKVTGFMLGLLASFESGSRGGWFAIPVFILIYFYFRTSRVSLKMAAASLIATSFVI
AFVYLASGTFQHRVNELINDIATFEQGNRDTSTGVRWQLYKAAADIFAHHPIFGVGPEGF
ALEMQPMLDAGKITPLAAELGRGEVHNDILSKAAGMGIFGLAALLASYFVPFGLFWRATK
STLREVRRAGILGIAFVSGILVFGVTVEFLNLTMATAFYGFTVAVLLAACYNVHYGVQIV
VHKPE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagtgcaacaacgttacttgtccattgtagagctgtcggcaacggtgctgcta
ttggcctatcccacggccatgatcgcggtgaaaggcggcatgaacggcgtgtttctgttg
atgttgttgctcgcccttgcagtttggctggcaagaccgaatggcattgaggctgtaatg
tggcgcagcgagttcaccatctacactgtttccatgtgtgcgatgtcggtggcgatactc
atcagccagacatatcttcaaaactatacagcgcatccatatgatgcggcatcgcgttac
tggctggctatcccggtgttcttgctgttgcagcgccttcgccctgccgttttcgtagta
ctgcaagttgcatttccactggctgccatcatcggttttatgatgtcgaatgatctggga
gcaggctccgagaacagatccggaataggtacactggatttgatccatttcggcgatctt
gaattgatctttggcgtactttcattgttcagcatcaactggctcgggcgagacaacaaa
ctattgcgccttttgaaagtgacgggcttcatgcttggattattggcatcattcgaatcc
ggctcgcgaggaggctggtttgcaattccagtgttcattttgatctatttttatttcagg
acatccagagtctcgctgaaaatggcagctgccagtttgatcgccacatcgtttgtcatt
gcattcgtatatcttgccagcggtacatttcagcatcgtgtgaatgaactgatcaatgat
attgcgaccttcgaacaaggtaaccgcgatacatcgacgggtgtgcgctggcagttatac
aaagcggctgcggacatatttgcacatcatccaatttttggtgttgggccggagggcttc
gccctggaaatgcagcccatgctggatgcaggcaagatcacaccacttgcagcagaactg
gggcgcggtgaagtccataatgacattttgtccaaggctgccgggatgggcatattcggc
ttggctgctttgctggccagttatttcgtaccgtttggtctattctggcgggcgaccaag
tcgacattgagagaggtcaggcgtgccggaatattaggcatcgcattcgtgagcggaatc
ctggtatttggagtgactgtcgagtttttaaatctgaccatggctacggcattctatggt
tttaccgttgccgtgctgcttgcggcttgttacaacgttcactacggcgtgcagatcgtc
gtgcacaaaccggaataa
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