Sideroxydans lithotrophicus: Slit_2900
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Entry
Slit_2900 CDS
T01196
Name
(GenBank) DegT/DnrJ/EryC1/StrS aminotransferase
KO
K21131
GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase [EC:
4.2.1.168
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00541
Biosynthesis of various nucleotide sugars
slt01100
Metabolic pathways
slt01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Slit_2900
Enzymes [BR:
slt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.168 GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase
Slit_2900
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Glyco_transf_7C
Motif
Other DBs
NCBI-ProteinID:
ADE13125
UniProt:
D5CQA4
LinkDB
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Position
complement(2916583..2917749)
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AA seq
388 aa
AA seq
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MSFKFPLATASWGQEEQDAMQRVIASGMYTMGANVQAFEGDFAKYVGSKHCVMVNSGSSA
NLLMVAALFYTKNSKLKLKRGDEVIVPAVSWSTTYYPLYQYGLKIKFVDIDLQTLNYDLE
QLEQAVTNKTRAIMAVNLLGNPNDFGRIRQIIGKREIVLIEDNCESMGAKFQDKQAGTFG
VMGTFSSFFSHHISTMEGGMIVTDDEELYQILLSLRAHGWTRNLPKQNLVCGEKSDDPFE
ESFRFVLPGYNVRPLEMEGALGIEQVKRLPKMVEERRKNGKLLQAALASHPDVIIQQEIG
ESSWFGFSLVIRPGSKLTRKALVVRLNELGFECRPIVAGNFAKNEVVKYFDSEVHGTLKN
ADHIDRNGLFVGNHHYPIPEAFEALAKL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaagtttcccttagccactgcctcctgggggcaggaagagcaagatgcgatg
caacgcgtcatcgcctccggcatgtacactatgggcgcaaacgtgcaagcctttgagggt
gattttgccaagtacgtcggcagcaaacactgtgtgatggtgaactcaggctcttccgcg
aatctgcttatggttgctgcgttgttctataccaagaattccaaattgaaactgaagcgg
ggcgatgaggtcatcgtgccggccgtgtcgtggagcacgacgtactacccgctgtatcaa
tacggattgaagatcaaattcgtcgatatcgacttgcaaacactcaactacgatctcgag
caactggaacaagccgttacaaacaagactcgcgccatcatggcggtcaatctgctggga
aacccgaacgatttcgggcgcattcggcagatcatcggcaaacgcgaaatcgtgttgatc
gaagataattgcgagtcaatgggtgcaaaattccaggacaaacaagcaggaaccttcggc
gtaatgggcacgttcagttctttctttagccaccacatctccaccatggaaggcggaatg
atcgttacggacgatgaagagctctatcaaatactattatctcttcgggcccatggctgg
acacgcaatctacccaagcaaaacctggtgtgcggtgaaaaaagcgatgatccgttcgag
gagtcgttccgctttgtgctgccgggctacaacgtccgccccctcgaaatggaaggtgct
ctgggcatcgaacaagtcaaacgactgcccaagatggtggaagaacgccgcaagaacgga
aaactgctacaagcggcgttggcaagtcatcctgacgtcatcatccagcaggagatcggt
gagagcagctggttcggtttcagcctggtgattcgtcccggtagcaagctcacgcgtaaa
gcgctggtagtgagattgaatgaactgggctttgaatgtcgaccgatcgttgcaggcaat
tttgccaagaatgaagtggtgaaatactttgattctgaagtgcacggtacattgaagaat
gccgatcacatcgaccggaacggtttgttcgtcggcaatcaccattacccaattcctgaa
gcgtttgaagcacttgccaagttgtag
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