Sideroxydans lithotrophicus: Slit_2993
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Entry
Slit_2993 CDS
T01196
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slt03016
]
Slit_2993
Transfer RNA biogenesis [BR:
slt03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Slit_2993
Prokaryotic type
Methyltransferases
Slit_2993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Roc
Ras
AIG1
RsgA_GTPase
MMR_HSR1_Xtn
Arf
ABC_tran
AAA_28
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
ADE13218
UniProt:
D5CQJ7
LinkDB
All DBs
Position
complement(2999900..3001243)
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AA seq
447 aa
AA seq
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MSLKPDNIAAIATAPGRGGIGVVRVSGSGLAAMAIILTGNRLTPRLATYTSFLAADGSTL
DQGICLFFPAPHSYTGEEVLELQGHGGPAVLQSLLHRCLELGARLAQPGEFTQRAFLNDK
MDLAQAESVADLIDATTEQAARSAMRSLQGEFSAAIHHAVSQLIDLRMLVEATLDFPEEE
IETADRLLCASKLNILMDGLARIAGLAKQGSILREGAQVVLVGAPNAGKSSLLNRFAGEE
IALVSEIPGTTRDSIRQALQVRGVPLHLIDTAGLRETNDAVEQMGIARTKLALTRADVVL
VLLDESRRRTEPEDFAVLAQLPAKTPCLYLHNKVDLSGHMPGVEIDADKIHIYLSAKTGA
GMEVLEEKLLESIGWHQETGVFMARTRHLEALATAGLHLEGARQQIDRPEIFAEELRHAQ
EALSSITGEFSADDLLGEIFSRFCIGK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctaaagcctgataacatcgcagcgatcgccaccgccccaggacgcggtggcatt
ggcgtggtgcgggtttcagggagtgggttggccgcaatggctatcatactgaccggaaat
cgccttacccccagactggcaacatacacctcattcctggctgccgacggtagcacgctc
gatcaaggtatctgcttgttcttccctgcaccccattcgtatacaggagaagaggtgctg
gagcttcagggccatggcggtccggccgtgctccaatccctgcttcatcgctgcttggag
ttgggcgcgcgtttggctcagcccggcgaattcactcagcgcgcctttcttaatgacaag
atggacttggctcaggcggaaagcgtggccgatcttattgacgcaaccactgaacaggcc
gcacgcagtgctatgcgttccttgcagggggagttctcggctgcgattcaccatgcggtg
tcacagctcattgatttgcgcatgttggttgaggcaacgctggattttcctgaggaagag
atcgaaacggccgaccgcctgttgtgtgccagtaaattaaacatattaatggatggactg
gcgcgaatcgcaggtttggccaagcagggtagcatcctacgtgaaggtgcacaggtcgtt
ctggttggtgcgcctaatgccgggaaatccagtctgctcaatcggtttgcgggcgaagaa
attgcgttagtaagtgaaattccgggcacgacccgggactcgatacgtcaggcactgcaa
gtacgcggcgtgccactgcacctgatcgatactgcaggactgcgcgaaactaacgacgca
gtcgagcaaatgggtattgctcgcaccaaactggcgctgactcgtgccgacgtggtgttg
gtactgctcgatgaatccaggcgacgcacggagccagaagactttgcagtacttgcacaa
ttgccagccaaaacgccatgtctctatctgcataacaaggtcgatctgagcgggcatatg
ccaggtgtggagatagatgctgacaagatacacatctatctttcagccaagacgggagcc
ggcatggaggtgttggaagaaaaattgctggaaagcatcggctggcatcaggaaactggt
gtcttcatggcgcgtacacgtcatttggaagcgcttgccaccgctggactgcacctagaa
ggagcccgccaacaaattgatcgaccagagatttttgccgaagaattgcgccatgcacag
gaggcattaagcagtattacgggtgaattttcggcagacgatctgctgggagaaattttc
agccgcttttgtattgggaaatag
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