Streptococcus lutetiensis: KE3_0172
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Entry
KE3_0172 CDS
T02775
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
slu
Streptococcus lutetiensis
Pathway
slu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KE3_0172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slu03019
]
KE3_0172
03016 Transfer RNA biogenesis [BR:
slu03016
]
KE3_0172
Enzymes [BR:
slu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KE3_0172
Messenger RNA biogenesis [BR:
slu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KE3_0172
Transfer RNA biogenesis [BR:
slu03016
]
Prokaryotic type
tRNA degradation factors
KE3_0172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
KH-I_KHDC4-BBP
OB_RRP5_4th
PCB_OB
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AGS04754
UniProt:
A0AB33AJP2
LinkDB
All DBs
Position
175019..177211
Genome browser
AA seq
730 aa
AA seq
DB search
MSKQTFETTFAGRPLVVEIGQVAKQANGAAVIRYGESTVLSAAVMSKKMSTGDFFPLQVN
YEEKMYAAGKFPGGFNKREGRPTTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
DSSAPMAAMFGSSLALSISDIPFNGPIAGVQVAYIDGEFIINPSAEQKEASLLELTVAGT
KEAINMVESGAKELSEDIMLEALLKGHEAVQELIAFQEEIVAAVGKEKAEVELLQVDPGL
QAEIITAYNADLQKAVQVEEKKTREAATEAVKEEVTAVYEERYADDENYETIMRDVAEIL
EQMEHAEVRRLITEDKIRPDGRRVDEIRPLDAEIDFLPKIHGSGLFTRGQTQALSVLTLA
PMGETQIVDGLGAEYKKRFLHHYNFPQFSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGSNYTI
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITPQILKEALAQAKKARFEILDLI
EATIPAPRTHLAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIEETAVKIDIDDEGNVSI
YSSDQAAIDRAKEIIAGLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEIAWT
RTANVSDVLEVGDEVDVKVIKVDDKGRVDASMKALLPRPPRAEKHEKEHKGHSPFGGHLR
DNKEKHDKID
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaacttttgaaacgacttttgctggtcgtccacttgttgttgaaattggt
caagttgctaaacaagctaatggcgctgcagtgattcgttacggtgaatcaactgttctt
agtgcagctgtcatgtctaaaaaaatgtcaactggtgacttcttcccgcttcaagtaaat
tacgaagaaaaaatgtacgctgctggaaaattccctggtggtttcaacaaacgtgaaggt
cgtccaacaactgatgcgactttaacagcgcgtttgattgaccgtccaattcgtccaatg
tttgctgaaggcttccgtaacgaagttcaagtgattaacactgttctttcttatgatgaa
gactctagcgcaccaatggcagccatgtttggtagctcactggctttgtcaatttcagac
attccatttaacggacctatcgctggtgttcaagtggcttacatcgatggtgaattcatc
attaatccatcagctgaacaaaaagaagcttcacttcttgaattaactgttgccggtaca
aaagaagctatcaacatggttgaatctggtgctaaagaattgtcagaagatatcatgctt
gaagctcttcttaaaggacatgaagcagttcaagaattgattgccttccaggaagaaatt
gtggctgctgttggtaaagaaaaagcagaagttgaattgcttcaagttgacccaggattg
caagctgaaatcattacagcttacaatgcggaccttcaaaaagctgttcaagtcgaagag
aaaaaaacgcgtgaagcagcaacagaagctgtcaaagaagaagtaactgctgtttacgaa
gaacgctacgccgatgatgaaaactatgaaacaatcatgcgtgatgtggctgaaattctt
gaacaaatggaacacgctgaagtccgtcgtttgattacagaagataaaatccgtcctgat
ggtcgtcgtgttgacgaaattcgtccattggatgctgaaattgatttcttgccaaaaatt
cacggttcaggtctatttacacgtggacaaactcaagccttgtcagttttgacacttgct
ccaatgggtgaaacacaaatcgttgatggacttggtgctgagtacaagaaacgtttcttg
caccactacaatttcccacaattctctgttggtgaaactggacgttacggtgcgccaggc
cgtcgtgaaattggtcacggtgctctcggtgaacgtgctcttgcgcaagttcttccaagc
cttgaagaattcccatatgctatccgtcttgtagctgaagttttggaatcaaacggttca
tcttcacaagcttcaatctgtgcaggtacccttgcgcttatggctggcggtgtgccaatt
aaagcacctgttgctggtatcgctatgggattgatttcagacggtagcaactacacaatc
ttgacagatatccaaggccttgaagaccactttggtgacatggactttaaggttgcaggt
actcgtgaaggtatcacagcccttcaaatggatatcaagattgaaggtatcacaccacaa
atcttgaaagaagctcttgctcaagctaagaaagcacgctttgaaatccttgatttgatt
gaagcaactatcccagcacctcgtactcacttggcaccaacagcaccaaaaatcgataca
atcaagattgatgttgataaaatcaaagtagttattggtaaaggtggtgaaaccatcgat
aaaattatcgaagaaactgctgttaaaattgacattgacgatgaaggaaatgtttcaatt
tactcatcagaccaagcagctatcgaccgtgccaaagaaattattgctggtttagttcgt
gaagctaaagttggtgaagtttaccacgctaaagttgttcgtattgaaaaattcggtgct
tttgttaacctctttgataagacagatgcccttgttcacatttcagaaattgcatggaca
cgtacagctaacgtttctgatgttcttgaagttggtgacgaagttgatgttaaagttatc
aaagtagatgacaaaggacgtgttgatgcgtcaatgaaagctcttcttccacgtccaccg
agagctgaaaaacacgagaaagaacacaagggtcattcaccgtttggtggacacttgcgt
gataacaaagaaaaacacgataaaatcgactaa
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