Streptococcus lutetiensis: KE3_0614
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Entry
KE3_0614 CDS
T02775
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
slu
Streptococcus lutetiensis
Pathway
slu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KE3_0614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slu03019
]
KE3_0614
03009 Ribosome biogenesis [BR:
slu03009
]
KE3_0614
Enzymes [BR:
slu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KE3_0614
Messenger RNA biogenesis [BR:
slu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KE3_0614
Ribosome biogenesis [BR:
slu03009
]
Prokaryotic type
rRNA helicases
KE3_0614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGS05122
UniProt:
A0AB33AKI2
LinkDB
All DBs
Position
560934..562511
Genome browser
AA seq
525 aa
AA seq
DB search
MKFTELNLSEAILATVEKAGFVEPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
DKIDTSRNLVQALVIAPTRELAVQGQEELFRFGREKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLEHVETLILDEADEMLNMGFLEDIEAIIRRVPETRQTLLF
SATMPEAIKRIGVKFMHNPEHVKVAAKELTTDLVDQYYIRVKEQDKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGYRAEGIHGDLDQGKRLRVLRDFKNDNIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKHGQSITFVAPNEMGYLSIIEKLTKK
RMKGLKPATADEAFKAKKKVALKKIERDFADEKVRNSFDKFKGDAVKLAAEFTPEELALY
ILSLTFKDPETLPKVEIAREKPLPFKPSGGGFNNRKGGRGNNGRGRDNRRGGRDRKRDDR
DNGYRDFKRTSSKNKRDFQNKDNKRPHRTSSEKKNGFVIRNKGER
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaacttaacttatcggaagcaatccttgctactgttgaaaaagcaggc
tttgttgagccatcaccaatccaagagttgacaatccctttggcattggaaggtaaggat
gttatcggacaagcgcaaactggtacagggaaaacagctgcctttggtctaccaacattg
gataaaattgatacaagtcgtaatcttgtccaagccttggttattgctccaacacgtgaa
ttagcggttcaaggtcaagaagaattgttccgttttggtcgtgaaaaaggtgttaaagtc
cgttcagtttacggtggttcaagcattgaaaaacagattaaagctcttcgttcaggtgct
catattgttgtcggaacaccaggtcgtttgcttgatttgattaaacgtaaagctttaaaa
cttgaacacgtagaaacattgattcttgatgaagcagatgaaatgcttaacatgggattc
ttggaagatattgaagctattatcagacgtgtgcctgagacacgtcagacacttcttttc
tcagctacaatgcctgaagcaatcaaacgtatcggggttaaattcatgcataatcctgaa
cacgttaaagtagctgctaaagaattgacaactgatcttgtcgatcaatactatattcgt
gttaaagaacaagataaatttgatacaatgactcgtctgatggacgttgatcaaccagaa
ttgtcaatcgtctttggacgtacaaaacgtcgtgttgatgaattgacacgtggtttgaaa
ttgcgtggttaccgtgctgaaggcattcacggtgatcttgaccaaggcaaacgtcttcgt
gtcttacgtgatttcaaaaatgataacatcgatatcttggttgcaactgacgtagctgct
cgtggtcttgatatttcaggtgttacacacgtttataactacgatattcctcaagatcca
gaaagctatgtacaccgtatcggacgtactggacgtgctggtaaacatggtcaatctatt
acttttgttgcaccaaatgaaatgggttatttgtcaattattgaaaaattgacgaaaaaa
cgtatgaaaggtttgaaaccagcaactgctgatgaagccttcaaagctaagaaaaaagtt
gctcttaagaaaattgaacgtgactttgctgacgaaaaagtccgtaacagctttgataaa
ttcaaaggagatgcggttaaattggctgctgaattcacaccagaggagttggcactttac
atcttaagcttaacctttaaagaccctgaaactcttccgaaagttgaaattgcgcgtgaa
aaaccattgccattcaaaccttcaggtggtggctttaacaaccgtaaaggtggccgtgga
aataatggccgtggacgtgataaccgccgtggcgggcgtgatcgcaaacgtgatgaccgt
gacaacggctaccgcgatttcaaacgcacatcatctaagaacaaacgtgatttccaaaat
aaagataacaaacgcccacaccgcacatcaagcgagaagaaaaatggatttgttatccgt
aacaaaggggaaagataa
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