Streptococcus lutetiensis: KE3_0734
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Entry
KE3_0734 CDS
T02775
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
slu
Streptococcus lutetiensis
Pathway
slu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KE3_0734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slu03019
]
KE3_0734
Messenger RNA biogenesis [BR:
slu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KE3_0734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lipase_bact_N
Motif
Other DBs
NCBI-ProteinID:
AGS05240
UniProt:
A0AB33AL10
LinkDB
All DBs
Position
688494..690155
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AA seq
553 aa
AA seq
DB search
MSDIKIIALGGVRENAKNLYVVEVNDSIFVLDAGLKYPENEQLGVDEVIPNLDYLIENKK
RVQGIFLTHGHADAIGALPYILQEFKAPVFGSPLTIELAKLFVKKNNNVKKFNNFHVIDA
ETEIEFADATISFFKTTHSVPESLGIVVGTDEGNIVYTGDFKFDQAARKYYRTDLGRLTE
IGREGVLALLSDSANATSHVMTASEAEVAAEMYSAIADAEGRVIIAAVASNLVRIQQVFD
SAAEYGRRVVLTGFDAENIVRTAIRMKRLRLVDEKLIIKPKDMHKYEDHELIILEAGRMG
EPINGLHRMALGRHRYIQIKDGDLVYIVTTPSLSKEAAVARVENLIYKAGGTVNLITKTL
NVSGHANGRDLQLMLNLLQPKYLFPVQGEYRNLAAHAELAQEVGMYPENIYIVKRGDVMV
LGKNGFNHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKKIVSK
AKIHTRGFVYVKKSRDILRESAELVNQTVENYLEQDSFDWGELKGAVRDEVAKFLFDQTK
RRPAILPVVMEVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattaaaattattgccctaggtggggttcgtgaaaatgcaaaaaacctctat
gtggtagaagttaatgactcaattttcgttttggatgctggactgaagtatcctgaaaat
gagcaacttggtgtagatgaagtcattccgaaccttgattacctaattgaaaacaaaaaa
cgtgtgcaagggattttcttgacacacgggcacgccgatgctattggagctttgccttat
attttgcaagaattcaaagcgccagtctttggttcaccacttactattgagttagcgaag
ctctttgttaagaaaaataacaacgttaagaaattcaataatttccacgttatcgacgct
gaaactgaaatcgaatttgccgatgcgacaatttcattcttcaaaacaactcactcagtt
cctgaaagtttagggattgtagttggtaccgatgaaggaaacatcgtctatacaggtgac
tttaagtttgaccaagcggcgcgtaaatattaccgtactgacttgggacgtttgactgaa
attggacgcgaaggtgtacttgcccttctttctgattctgctaatgctacaagtcacgtc
atgacagcaagcgaagcagaagttgctgctgaaatgtatagcgctattgctgacgctgaa
ggtcgcgttatcattgctgcggttgcttcaaaccttgtgcgtatccaacaagtctttgac
tcagctgctgaatatggtcgtcgtgtagtcttgactggttttgacgctgaaaacattgtt
cgcacagcgattcgcatgaaacgtcttcgtttggttgatgaaaaattaatcattaaacca
aaagacatgcacaaatacgaagaccatgaattgattattcttgaagctggtcgtatgggt
gaaccaattaatggtctacacaggatggcacttggtcgtcaccgttatattcaaattaaa
gatggcgatttggtttacatcgttacaacaccaagtctttcaaaagaagcagcagttgcg
cgtgttgaaaacctaatttacaaagctggtggtacggttaatcttattacgaagacactt
aatgtctcaggtcatgccaatggacgtgatttgcagttgatgcttaaccttcttcaaccg
aaatacctttttccagttcaaggtgagtaccgtaatttggcagctcatgctgaattggca
caagaagtgggaatgtaccctgaaaacatctatatcgtgaaacgcggcgatgttatggtt
cttggtaaaaatggtttcaaccatgaaggtagtgtaccagcaggggatgtcatgattgat
ggtaatgctatcggtgatgtcggaaacatcgttcttcgtgaccgtaaagtcttgtcagaa
gatggtatcttcatcgttgccttgactgttaataaacgcgaaaagaaaattgtatcaaaa
gcaaaaattcacacacgtggatttgtttacgttaagaagagccgtgatattcttcgcgaa
tcagctgaattggttaaccaaaccgttgaaaactacttggaacaagatagttttgactgg
ggtgaattaaagggagctgtccgcgatgaagtggctaaattcctcttcgaccaaaccaaa
cgtcgcccagctatcttaccagtcgttatggaagtgagataa
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