Streptomyces luteireticuli: AB8735_17685
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Entry
AB8735_17685 CDS
T11183
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
slua Streptomyces luteireticuli
Pathway
slua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB8735_17685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slua03021
]
AB8735_17685
03400 DNA repair and recombination proteins [BR:
slua03400
]
AB8735_17685
Enzymes [BR:
slua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB8735_17685
Transcription machinery [BR:
slua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB8735_17685
DNA repair and recombination proteins [BR:
slua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB8735_17685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
XEZ41117
LinkDB
All DBs
Position
complement(3998453..4002352)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDDERRTRDLPSLEAHVSVERQQIEQRRDADLEARAKKLESD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFSGAMGAAALQKRLESFDLEEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTRNSPSGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVKGE
GRSFASVAEAIMAFDARELSLQAKVDIRFPIGTVPPRGWTPPVAEEGEPEWQTGDSFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAISDVVVPEAKKEIVKGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLAIAVRG
EDGVLRKADDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDQLVAHGVETVKTRSVL
TCESAVGTCAYCYGRSLATGKLVDIGEAAGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKIVVTPDDGSDETAFPISKRARL
LVAEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSRFETENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggcctggcgaccgcggacgacatc
cgaacctggtcccacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
ccggaaaaggacgggctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatttgtgagcgctgcggcgtc
gaggtcacccgcgccaaggtgcgccgtgagcggatgggccacatcgagctcgccgccccg
gtcacccacatctggtacttcaagggcgttccgagccggctgggttacctgctggacctc
gcgcccaaggacctcgagaaggtcatctacttcgccgcctacatgatcacgtgggtggac
gacgagcgccgcacccgcgatctgccgtcgctggaggcccacgtctccgtcgagcgccag
cagatcgagcagcgccgcgacgccgacctcgaggcccgtgccaagaagctcgagtccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gccgagcgtgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgtctcgac
gaggtctggaaccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttctcgggtgcgatgggcgccgccgcg
ctgcagaagcgcctggagtccttcgacctggaggaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gccttcctgcagacccgcaacagccccagcggcatggtgctggactgcatcccggtgatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactccttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgcttcaggaggccgtcgacgcg
ctcttcgacaacggccgtcgtggtcgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggtcgcttccgtcagaacctgctcggcaag
cgcgtcgactactcggcccgttccgtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcggccgc
acggtcgtgtacgacgtgctggaagaggtcatcgcggagcacccggttctgctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgtccggtcaccatgccgacccaggac
atggtgctcggtctgttcttcctcaccaccgatgaggaggagcgcgaggtcaagggcgag
ggccggtccttcgcgtccgtcgccgaggcgatcatggcgttcgacgcccgtgagctctcg
ctccaggcgaaggtcgacatccgcttcccgatcggcaccgtcccgccgcgtggctggacc
ccgccggtggcggaagagggcgagccggagtggcagacgggcgactcgttccgcctgcgc
accacgctgggccgtgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttccactgggcgacc
cgttccggcgtcaccgtggccatctccgacgtcgtggtccccgaggccaagaaggagatc
gtcaagggttacgaggcccaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgcgaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcggcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcctcgttccgcgagggtctgtcc
gtgctggagtacttcatctccacccacggtgcccgtaagggtctcgcggacaccgccctc
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcccaggacgtgatc
atccgcgaggaggactgcggcaccgaccgtggcctcaagctggcgatcgcggtccgcggc
gaggacggcgtgctgcgcaaggccgacgatgtcgagacgtcggtgtacgcccgcatgctg
gccgaggacgtcgtcgtcgacggcaaggtcatcgcgccggccaacgtcgacctcggtgac
gtgctcatcgaccagctcgtcgcccacggcgtcgagacggtcaagacccgctcggtcctc
acctgcgagtccgcggtcggcacctgtgcctactgctacggccgctcgctggcgaccggc
aagctggtggacatcggcgaggcggcgggcatcatcgccgcccagtcgatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgtgtcgtcgagctcttcgaggcccgtacgcccaagggtgtcgccccg
atctccgaggccgccggccgcgtccggatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagacggcgttcccgatctcgaagcgtgcccgtctg
ctggtggccgagggcgaccacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcattctgggtcagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctccgccgcgtgacgatcatcgagtccggcgacgcggagctgctgccg
ggcgagctcgtggagcgctcgcgcttcgagacggagaaccgtcgcgtggtccaggaaggc
ggccacccggcctccggccgtccgcagctgatgggtatcaccaaggcctcgctggccacg
gagtcctggctgtcggccgcctccttccaggagacgacccgagtgctgacggacgcggcg
atcaacgccaagtccgactcgctcatcggcctcaaggagaacgtgatcatcggtaagctc
atcccggccggtacgggtctgtcccgttaccggaacatccgggtcgagccgaccgaggag
gcgaaggccgcgatgtactcggccgtcggttacgacgacatcgactactcgcccttcggt
acggggtccggtcaggcggttccgctggaggactacgactacgggccgtacaaccagtag
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