Streptomyces luteireticuli: AB8735_20120
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Entry
AB8735_20120 CDS
T11183
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slua Streptomyces luteireticuli
Brite
KEGG Orthology (KO) [BR:
slua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slua03021
]
AB8735_20120
Transcription machinery [BR:
slua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB8735_20120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
DUF7343
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
XEZ41537
LinkDB
All DBs
Position
complement(4523443..4524279)
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AA seq
278 aa
AA seq
DB search
MSVDLGSAKVLATDDAPHAVPADCEAIDTRTLSRSLFLRLAALERDSAERTYVRDTLIEL
NLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRF
FRDTSWSVRVPRRLQELRLALTKASDELAQKLDRSPTVPELALCLGVSEEDVVDGLAVGN
AYTASSLDSPSPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERQIIMLRF
FANMTQSQIGEEVGISQMHVSRLLTRTLSQLREGLIAD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagacctgggcagcgcgaaggtgctcgccactgacgacgcaccgcacgccgtg
ccggccgactgcgaagccatcgacacccgcaccctctcccgctccctgttcctgcggctg
gcggccctggagcgggacagcgccgagcgtacgtacgtccgtgacaccctcatcgagctc
aacctccccctggtgcggtacgcggcggcgcgcttccggagccgcaacgagccgatggag
gacatcgtccaggtcggcaccatcgggctgatcaaggccatcgaccgcttcgactgcgaa
cggggggtggaattccccacgttcgcgatgcccaccgtggtcggtgagatcaaacgcttc
ttccgggacaccagttggtcggtcagggtgccgcgccggctccaggagctccggctcgcc
ctgacgaaggccagcgacgagctcgcgcagaagctggaccgctcgccgacggtgcccgaa
ctggccctgtgcctgggcgtctccgaggaggacgtggtcgacggcctcgcggtgggcaac
gcctacacggccagctcgctggactccccctcgcccgaggacgacggcggcgagggctcg
ctggccgaccgcctcggttacgaggacacggcgctggagggcgtggagtaccgggagtcg
ctcaagccactgctggccaaactgccgccgcgggaacgccagatcatcatgctccggttc
ttcgcgaacatgacgcagtcccagatcggcgaggaggtcggcatctcccagatgcacgtc
tcgcggctgctgacgcggacgctctcccagctgcgcgagggcctgatcgccgactga
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