Streptomyces luteireticuli: AB8735_28980
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Entry
AB8735_28980 CDS
T11183
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
slua Streptomyces luteireticuli
Pathway
slua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB8735_28980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slua03000
]
AB8735_28980
03400 DNA repair and recombination proteins [BR:
slua03400
]
AB8735_28980
Enzymes [BR:
slua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AB8735_28980
Transcription factors [BR:
slua03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AB8735_28980
DNA repair and recombination proteins [BR:
slua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB8735_28980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
XEZ43175
LinkDB
All DBs
Position
6439137..6440594
Genome browser
AA seq
485 aa
AA seq
DB search
MNASTDDLRYQAVSSRDARFDGTFFFAVATTGIYCRPSCPAVTPKRRNVRFYPSAAAAQG
AGFRACRRCRPDAVPGSAEWNLRADLVGRAMRLIGDGVVDREGVQGLADRLGYSTRQVHR
QLTEELGAGPVALARAQRAHTARVLLQTTDLPVTETAFAAGFASVRQFNDTIRAVYAQTP
TALRGTPRRAGDAAPPGGIPLRLAHRGPYAAREVFGFLGRRAVPGAEEMTGVPGARTYRR
TLRLPYGTGIAEVREPHRAAAGWLACRLHLTDLRDLAAAVQRVRRLFDLDADPDAVAERL
GADPVLGPLVAARPGLRSPGAADADELALRAVLGQQVSVAAATRLGARLVAAHGTPLAAP
DGTLTHLFPEPAALADAEFDGMPEARRDTLRTVAAALADGTVRLDPGADRDDTGRRLLAL
RGVGPWTAGYIRMRALGDPDVFLPGDAGARRALTALGARPGAEDAWRPWRSYALHHLWNL
WDKDS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcctccaccgacgacctccgctaccaagcggtcagcagcagagacgcccgcttc
gacggcacattcttcttcgccgtcgcgacgaccggcatctactgccggcccagttgcccg
gccgtcacccccaagcggcggaatgtccgcttctatccgtcggccgccgccgcgcagggc
gccgggttccgggcctgccggcggtgccggcccgacgcggtgccggggtcggcggagtgg
aacctgagggccgacctcgtcggccgggcgatgcggctgatcggcgacggcgtcgtggac
cgcgagggcgtccagggcctcgccgaccggctcggctacagcacccgccaggtgcaccgg
cagctcaccgaggagctcggcgccggtcccgtcgccctcgcccgcgcccagcgcgcccac
accgcgcgcgtcctgctgcagaccaccgacctgccggtcacggagaccgcgttcgcggcc
ggtttcgcgagcgtgcggcagttcaacgacaccatccgcgccgtctacgcgcagaccccc
accgccctgcggggcacaccccgcagggcaggggacgcggcaccgccgggcggcatcccg
ctccggctggcgcaccgcggcccgtacgccgcccgggaggtcttcggtttcctcggacgc
cgggcggtcccgggggccgaggagatgacgggcgtcccgggcgcccggacctaccgccgc
accctgcggctgccgtacggcactggcatcgccgaggtccgggagccgcaccgggcggcg
gccggctggctcgcctgccggctgcacctgaccgatctgcgcgacctggccgccgccgtc
cagcgcgtccggcgcctgttcgacctggacgcggacccggacgccgtcgccgaacggctg
ggcgccgacccggtgctggggccgctggtggcggcccggccgggactgcgctcgcccggc
gcggcggacgcggacgagctcgcgctgcgggccgtgctcggccagcaggtctccgtcgcg
gcggccacccgcctcggcgcccggctcgtcgccgcgcacggcaccccgctcgcggccccg
gacggcacgctcacccatctcttcccggagcccgcggccctggccgacgcggagttcgac
ggcatgcccgaggcgcgccgggacaccctgcgcacggtcgccgccgccctcgcggacggc
accgtgcgcctcgacccgggcgccgaccgcgacgacaccgggcggcggctgctcgccctg
cgcggcgtcggcccctggaccgccggctacatccggatgcgggcgctcggcgacccggac
gtcttcctcccgggcgacgccggggcgcggcgcgcgctcaccgccctcggcgcccggccg
ggagccgaggacgcctggcggccctggcgctcgtacgccctgcaccacctctggaacctc
tgggacaaggactcctga
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