Sander lucioperca (pikeperch): 116034232
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Entry
116034232 CDS
T07345
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X5
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116034232 (lrba)
Membrane trafficking [BR:
sluc04131
]
Endosome - Lysosome transport
Others
Others
116034232 (lrba)
Endosome - Golgi transport
116034232 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
116034232 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
EIF3I
SUKH_6
Motif
Other DBs
NCBI-GeneID:
116034232
NCBI-ProteinID:
XP_031132662
Ensembl:
ENSSLUG00000008831
LinkDB
All DBs
Position
4:complement(34230159..34431862)
Genome browser
AA seq
2934 aa
AA seq
DB search
MASEETAGSAQPGDGKDGRSGAMALNPGVPIRGIKMKFAVLAGLVEVGEVSNRDIVETVF
NLLVGGQFDLEMNFIIQEPESIVCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTD
VGLIQQVLQRISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKGQWPRHAVKL
LSVLKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKD
KPYLYCFRTNKGMGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHTYNR
WKNSEISCYVNGELASFGDIAWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEA
LSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFAYNPRATDAQL
CLESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYCQPSS
HELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIVLA
FSRYLSNLQNGILLLKQLCDHILFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNTVRR
VGTVLQVMHTLKYYYWVINPQDRSGVVPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDH
GVKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHPVSMVQAFDQRNGIRVIYKLLAS
KSEGIRVQTLKVMGYFLKHLPPKRKPEVMLSHGLFSLLTERLMLHASQFTMTTYNVLFEI
LTEQICTQVIHKQHPDPDSTVKILNPQILKVVAALLKSSPPSPESMEVRKVFLSDMIKLF
NNSRENRRSLLQCSVWQEWMLSLCFISPQNSEEQKITEMVYAIFRILLYHAIKYEWGGWR
VWVDTLSITHSKVTFEQHKENLSRMFRQYQRQESAGSVNTIRTISGVSQSSETTESLNGP
PAEETAPSTVIELTVDKLSQKSPDSASSSTVTSSTPEAADGRGHASITISNILASAEEEE
EEEEQKLVQESSKEASRDDGKETEATVTQKTDKEKPTEQTSTDENTDDLQTSLSDQPETG
DTKAMEEIRDSATTSVRDDEKLEPIKVESSSSVPEGSLKEADTELAVASKQDGKTDQTTP
EAAAFLENSVLGGASVFNEDLVDMSSVSDQIHPSDADDSQEESSYASAIAGEEVEEGGKK
EEDSHEDGKGKKDDQEGHEMKTDEEKDEKQEVGIQEKTEESETEEKGVSGLESQTPPAET
PEQSVAEPPKEKVEGEHSSSLTNTATADQQHSDTTPPSAAQEVAAASDATSPSQPLETLA
GPTAASSSDTQKRADSVSKTKEIKIARLDVSNVALDTERLELKETSTTETSQPAAAAAGG
ASGQQREGSTSAPRSTMFRIPEFRWSHMHQRLLADLLFSIETDVQMWRSHSTKTILDFVN
SSENVVFVHNSIHLISQVVDNLIMACGGILPLLSAATSSSHELENIESSQGLAVEASVTF
LQRLINLVDVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVCAMAVRNCLECQQAQVKHV
AEASARGTAMSSTGLGGAMSTAAQSPVDAVTGGMSPVRDLDRLLQDMDINRLRAVVFRDI
EDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKKQPQRSQSARSTDSGAVSGGLEVEN
GVSLRRYDSGIGDDHTSTAASEADLSSSGVTHGPDAVSEALSTLSSEVRPSLPADSKGKN
VKDILRSLVSAPADDIMVDPSLLPPSFLGSVGDAARQSSLQFRSFDRSVVVAPKKAGMAP
SPGTSTAVPAATAASVSGGTPIESVAVVSSGDASQSTSADFAATGGQVPASTSLPSVPPL
SPVTQNTAPNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVC
MKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFIL
SRQRAEDIHKHAEFESNCAQYAAEKRDEEKMCDHLIRAAKYRDHVTATQLIQKIVNILTD
KHGAWGSSSISRPREFWRLDYWEDDLRRRRRFIRNPYGSTHSEAALKAAAEHVADISASE
EDILKGKQSIRSQALGNQNSESETSLDGDDDTLSSLEEKDLENLTGPVNLSTSGQLVAPA
AVVRGTLSITASELYFEVDEDEPGFKAIDPKILAYTEGLHGKWLFTEIRAVFTRRYLLQN
TALEIFMANRTAVMFNFPDAATVKKVVHSLPRVGVGTNFGLPQTRRISLATPKQLFKASN
MTQRWQRREISNFEYLIFLNTISGRTYNDLNQYPVFPWVITNYDSEELDLTLPSNFRDLS
KPIGALNPKRAAFFSDRYESWDDDQVPKFHYGTHYSTSSFTMMWLLRIEPFTTFFLNFQG
GKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPDMFINANSYNLGVMEGNTVVSN
VELPPWAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEATRALNVFYYLTYE
GAVNLSSINDPMLREAVESQIMSFGQTPCQLLIEPHPPRSSAMQVTPLMFTEQMQQDVIM
VLKFPSNSPVTHVAANTQAGLTSPAIITVTANRIFAVNKWHGLTGHQSSTVQDQQYQLPV
EIDPLIANNVGSHRRQISDLLDQSIQISSQCFVITADNRFILLCGFWDKSFRVYSTDSGK
LTQIVFGHRDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKHNSIGESPGTEFTTP
RAILTGHDCEVTCASVCAELGLVISGCKEGPCLIHSMNGDLLRTLEGPERCLRPRLIQSS
TEGHCVIYYDKGQFCRFSVNGKLLGHMEMEDSIKAMYLSRDGQYLLTGGDGGVVSVWQVH
DLKQLFTYPGCDAGIRSMTMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8805 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacagcgggctctgcgcagccaggtgatggaaaggacgggagatca
ggcgccatggcgctcaaccccggagtgcctatcagggggataaagatgaaattcgccgtg
cttgctggcctggtggaagttggggaagtttccaaccgagacattgtggagacggtgttc
aacctgctggtcggcggccagtttgacctggagatgaacttcatcatccaagaacctgag
agcatcgtgtgcatggtggagctgttggacaaatgtgagcccacctgtcaggccgaggtc
tggagcatcttcaccgcaatcctcaagaagagcgtccgcaacctgcaggcgtgcactgat
gtggggctaatccagcaggtgctccagcgtatatccaccactgacagcatgatcgcagac
ctactggtggacatgttgggcgtgctcgccagctacagcatcaccgtaaaagagctgaag
cttttcttcagcaaactgcaaggggagaaaggccagtggccacgtcatgcggtgaagctt
ttatcagttctgaagtacatggctcacaggaatggcccagactcattcttcagctttcca
gggaaaaatgcagctgctatagctctgcctcctatagcaaaatggccgtaccagaatggg
tttacattccacacgtggctccgcatggatcctctcaacaacatcaatgtagacaaagac
aagccttacctatactgtttccgcaccaataaaggcatgggttactctgcacactttgtg
ggtggctgtttgatagtgacctcattaaaatccaaggggaaaggattccagcactgtgta
aagtacgacttcaaaccccagaagtggtacatggtgactctcgttcacacctacaaccgc
tggaaaaacagtgaaattagctgctatgtgaacggggaactggcgtcctttggagacatc
gcctggtttgtgaacaccagtgacacgtttgacaagtgtttcctgggatcgtctgagacg
gcagatgccaaccgtgtgttctgcggacagatgggggcagtttacctgtttggagaggct
ctcagcgctgctcagatcctggctatctatcagctggggccgggataccagggcacattc
aagtacaaggctgagagtgacttgctgtttgcggagcatcataagaccttactgtatgat
ggcaagctgtcctctagtattgccttcgcttataaccctcgcgccacagatgcccagctc
tgcctcgagtcctcccccaaggacaacgcctccattttcgtccactcaccccacgcactc
atgctgcaggacgtgaaggccgttgtgactcattcagtccagagtggcatacactctatc
gggggcgtgcaggtcctcttccctctgtttgcacagctggattattgccagccctccagc
cacgagctggacacttctgtctgctgcactttgctatcctttgtgatggagctcttgaag
aactcagtggctatgcaagagcaggtcctggcctgcaaaggctttctcgtcattggctat
actttggagaagtcgtccaaggtgcatgtgacgcggcccgtcctggacattgtgctggcc
ttttccagataccttagcaacttgcagaatggcatcttgctgctcaagcagctgtgtgac
cacattctgttcaaccctgccatctggatccatgcccctgccaaggtgcagctgacgctc
tacacttacctggcaacagagttcatcagcacagtgaccatctacaacaccgttcgcagg
gtgggcactgtacttcaggtcatgcatacactgaaatactactactgggttatcaacccc
caggaccgcagtggagtcgtgcccaaaggcctagatggtccaaggccaaaccagaaggag
atccattctttgcgagcctttctgttgttgtttgtcaagcagctcataatgaaggatcat
ggcgtgaaggaagacgagctacagagtatcctcaactacctccttaccatgcatgaggat
gacaatctcatggatgtactgcagttgttggtggctttgatgtctgaacatccggtgtcc
atggtccaggccttcgaccagcgcaacgggatccgtgtgatttacaagcttttggcctca
aaaagtgaaggaataagagtgcagactctcaaagtaatgggctactttctgaaacacttg
ccaccaaagaggaaacctgaggtcatgctgagtcatggccttttctccctgctcactgaa
cgcctgatgctccacgctagccagttcaccatgacaacctacaacgtgctcttcgagatt
cttacagagcagatctgcactcaagtgatccataaacagcatccggaccccgactccact
gtgaagattctcaacccacaaattctgaaggtagtagctgctctgctgaagagttccccc
ccatcccccgagagcatggaggtgcgcaaggtctttctgtcagacatgatcaaactgttc
aataacagccgagagaaccgcaggagcctgctgcagtgctcggtgtggcaggagtggatg
ctctctctgtgcttcatcagcccgcaaaacagcgaggagcagaaaatcacagagatggtg
tacgccatcttccgcatcctgctctaccacgccatcaaatatgagtggggcggctggcgc
gtctgggtggacaccctgtccatcacccactccaaggtcacctttgagcagcacaaagag
aatctgtcccgtatgttccgtcagtaccagcgtcaggagtctgcaggctctgtgaacaca
atccgaaccatctctggcgtcagccaaagctcggaaaccacggaatctcttaacgggccg
cctgcggaggagacggccccttctaccgtcattgagctcacagtggacaagttgtcccag
aagtcccctgactcagcatctagttccactgtcacgtccagcacaccggaggctgctgat
ggaaggggacacgcatccatcaccatctccaacatcctggccagcgcagaagaagaagaa
gaagaagaagagcagaagttggttcaggagtcttccaaggaggcctccagggatgatgga
aaagagactgaagctaccgtgacccaaaaaaccgataaagagaaaccgactgaacagacc
tccactgacgagaacactgatgatctacaaacgtcacttagcgaccagcctgaaaccggt
gacacaaaagcaatggaagagattagagactctgctacaacatctgtaagagatgatgaa
aaattggaacctatcaaagttgaatcatcaagctccgttccagaaggctctttgaaagaa
gcagatacggaactggcagtggcttcaaaacaagatggcaagactgaccaaacaaccccc
gaggctgcggccttcttggagaacagtgtgctggggggagcctccgtcttcaacgaggac
ctggttgacatgtcctctgtcagtgaccagatccacccaagtgacgctgatgatagccaa
gaggagtcctcttatgcatcagctattgccggagaggaagtggaggaaggcggaaaaaag
gaggaagattcacatgaagatggtaaaggcaagaaagacgatcaggaaggtcatgagatg
aagacagacgaagaaaaggatgagaagcaggaggttggaatacaagaaaaaactgaagag
agtgaaactgaagagaaaggggtgtctggtttggagagtcagactcctccagccgaaaca
cctgaacaaagtgtggcagaaccgcccaaagaaaaagttgaaggtgagcactcttcatcc
ctaactaatactgctactgcagaccagcagcactccgacaccacaccgccctctgcagcc
caggaggttgcggcagcatcggacgccacctcacctagccagccattagagaccctggct
ggtcccacagccgcctccagctctgatacccagaagagagcagactctgtcagcaagacc
aaagagatcaaaattgcccgactggatgtgtccaatgtggccttagacacagagagactt
gagttaaaggagacctctacaacagaaacgagccagccggcggcagcagcagcaggaggg
gcttcaggtcagcagagagagggcagcacttcggcccctcgttccaccatgtttcgtatc
ccagagttccgctggtcccacatgcaccaacgcctcctcgctgacctgctcttctctatt
gagacagatgtccagatgtggaggagtcactccacaaagacaattttggactttgtgaac
agcagtgagaacgtcgtgtttgtccacaacagtattcacctcatctcccaggtggtggac
aacctcatcatggcttgtggaggcattttacctctgctctctgctgccacctcttcctct
catgaactggagaacattgaatcatcccaaggcttggcggtggaggcttcggtcaccttc
ttacagcgcctcatcaacctcgtggatgtcctcatctttgccagctcgctcaacttcact
gagatagaagctgagaaaaacatgtcgtcaggaggcatcctgcggcagtgccttcgcctc
gtgtgtgctatggcagtgagaaactgtctggagtgtcaacaagcccaagttaagcatgtt
gcagaagcctcagcccgcggcacagccatgtccagcactgggcttggaggagccatgtct
acagctgcgcagagtcctgtagatgcagtgacaggtgggatgtctccagtcagagacctg
gaccggcttcttcaggacatggacattaaccgcctcagggctgtcgtcttcagagatatc
gaggacagtaagcaggctcagtttctggcgcttgccgttgtctacttcatctcagtcctc
atggtgtctaagtaccgcgacatcctggagccccacaatgacaagaaacaacctcaaaga
tcccagtctgccaggagcacagacagcggtgccgtttctggtggactagaagtggaaaat
ggggtttctctccggcggtatgactctggcatcggtgacgaccacacctcaaccgccgcg
agcgaggcagacctgtcatcctctggcgtgactcacggtccagatgccgtctcagaggcc
ctgtctacactgtcttctgaggtcagaccttctctgcccgccgattcaaagggcaagaat
gtgaaggacattctgcgcagccttgtgagcgctccagctgatgatatcatggtggatcca
agtctgctgccaccgtcctttctagggagtgtgggcgatgcggccagacaatcatccctg
cagttccgctcctttgatagaagtgtcgtcgttgcacccaagaaagcgggcatggcacct
tctccaggcacttctactgctgtcccagcagccactgctgcgtctgtgtctggtgggaca
cctatcgaaagcgttgccgtggtatcttctggtgacgcctcccagagcacctctgcagac
tttgcagctacaggcggccaggttccagccagcactagcctgccatctgtccccccactc
tcccctgtgacccagaacacagcccccaatatgagtatctcggagcgtctggagcatgct
ctggagaaggcagctcctctgctgagagagatctttgtggactttgctcccttcctgtct
cggaccctgctgggcagccatggacaagagctccttattgagggcacgagcctggtgtgt
atgaagtccagcagctcggtggttgagctcgtcatgcttctgtgttcacaggaatggcag
aattccatccagaagaatgcaggtctcgcctttatcgagttggtcaacgaaggcaggctg
ctgagccacaccatgaaggaccacctggttcgtgtggctaatgaagctgaatttatcctt
agccgacagagggccgaagacatccataagcatgcagagtttgagtcaaactgtgctcag
tacgcagcggagaagcgagatgaggagaaaatgtgcgaccacctgatccgagcagccaag
taccgcgaccatgtgacagccacacagctcatccagaagatcgtcaacatcctgactgac
aaacatggagcctggggaagctcttccataagccggccgagggagttctggcgcctggac
tactgggaggacgatttaaggcggcgacgtcgcttcatcaggaacccctacggatccact
cactcagaggctgcgctcaaagccgcggccgaacacgtggctgatatcagtgcgtccgag
gaggatattctcaaaggcaagcagtccatcaggagtcaggctctgggaaatcaaaactcg
gagagtgagacatcacttgacggagacgatgacacgctgtcatccttagaggagaaggac
ctggagaacttaacaggcccggtaaacctgagcaccagtggccagctggtggctccggcc
gcggtggtgagaggcaccctgtccatcaccgcctccgagctctacttcgaggtggacgaa
gacgagccgggcttcaaggccatcgatcccaagattctagcctatacagaaggtcttcat
ggaaaatggctgttcacagagatccgcgctgtctttaccagacgctacctactgcagaat
actgctctggaaatcttcatggccaacagaacggcagtcatgttcaacttcccagatgca
gccacggtcaagaaggtggtccacagtcttcctcgtgttggggttggcacgaactttggc
cttccacagaccagacgtatctctctggccacaccaaagcagctattcaaggcatccaac
atgacccagcgctggcaacgccgcgagatatccaactttgaatacctcatctttctcaac
accatctctggtcggacctataatgacctaaaccagtacccggtcttcccctgggttatc
accaactacgactcagaggaacttgacctcactctgcccagcaacttcagagatctgtcc
aagcccattggtgctctgaatcccaagagggcagcattcttttcagaccgatatgagtcc
tgggatgatgatcaggtgccgaaattccattatggcacccactattccacctccagcttc
accatgatgtggctactccgtatcgaacccttcaccacattttttctcaacttccaagga
gggaagtttgaccacgctgaccgcaccttctcctcagtgtctcgggcctggaggaactgc
cagagagacacatctgatgttaaggagctgatcccagagttctactacctccccgatatg
tttatcaacgccaacagttacaacctgggagtgatggagggcaacactgtagtgtctaat
gtggagctgccaccttgggccaagagcccagaggagtttgtacgcatcaatcgcctggct
ctggagagcgagtttgtgtcctgccagctccaccagtggatcgatctgatctttggctac
aagcagcagggacctgaagccaccagagccctcaatgttttctattatctgacctacgaa
ggtgcagtcaacctcagctccatcaatgaccccatgctcagagaggctgtggagtctcaa
atcatgagttttggacagaccccctgccagttgctcatcgagccacacccaccccgaagc
tcagccatgcaagtgaccccgctgatgtttacggagcagatgcagcaggatgttatcatg
gtgctgaagttcccatccaactctcctgtgacccacgtagcggccaacacccaggcaggt
ctaacgtcacctgccatcatcaccgtcaccgccaaccgaatctttgccgtcaacaagtgg
cacggattgacaggtcatcagagctcaacggtgcaggaccagcagtaccaacttcctgtg
gaaattgatcctctgatagccaataatgtgggcagtcatcgtcgtcagatctcagacctg
ctggaccaaagcattcagatcagctcgcagtgtttcgtcatcacagccgacaaccgcttc
atccttctgtgcggcttttgggacaagagcttccgggtttactccactgactcaggcaaa
ctgactcagatagtgtttgggcatcgtgacgtggtgacgtgtctggctcgctctgagtcg
tacattggaggagactgctacgtcctgtcaggctcccgagatgccaccctgctgctgtgg
tactggaacggaaagcacaacagcattggagagagtccaggcacagagtttaccacaccg
cgggccatcttaacgggccatgactgtgaagtgacatgtgcgagtgtgtgtgcggagttg
ggtctcgtcatcagtggctgcaaagagggtccttgtctgatccattccatgaatggggac
cttctgcggaccctggagggccccgagcgctgcctgcggcctcgtctcatccaatcctcc
actgagggacactgcgtgatctactacgacaaggggcagttctgtcgcttcagtgtcaac
ggcaaactgctcggacacatggagatggaagacagcatcaaggccatgtatctgagtcgg
gatggccagtatctgctgacaggcggagatggaggtgtagtgtctgtctggcaggtccac
gacctcaaacagctgttcacctacccaggctgtgacgcaggaatccgctcaatgaccatg
tcgcatgaccaaaggtgcatcataactggcatggcatctggaagtatcgtgctcttctac
aacgacttcaacagatggcaccacgagtaccagaccaggtactga
DBGET
integrated database retrieval system
