KEGG   Sander lucioperca (pikeperch): 116034271
Entry
116034271         CDS       T07345                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
sluc  Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sluc03041]
    116034271
Spliceosome [BR:sluc03041]
 Complex B
  Other components
   Complex B specific factors
    116034271
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_Gbeta NBCH_WD40 Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C WDR90_beta-prop_4th LisH_TPL Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_TEP1_C Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_EMC1_N VPS8_N WDR54 Beta-prop_WDR11_2nd Beta-prop_IFT122_2nd DUF7165 PQQ LisH
Other DBs
NCBI-GeneID: 116034271
NCBI-ProteinID: XP_035855931
Ensembl: ENSSLUG00000014681
LinkDB
Position
4:complement(30491459..30500360)
AA seq 511 aa
MAVEMEPADVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIKSGHWDSVL
LAIKSLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYIHLENL
LTCSYFDPREAYLKGSSKEKRRRAIAEALVREVSVVPPSRLMGLLGQVGSMRIQQYAGHV
FPDTTIETSGNKDKHVEKESFPTQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEV
WNFNTGKISKDLKYQAQESFMMMDDAVLCMCFSQDTDLLATGAQNGKIKVWNIQSGLCLW
RFDHAHNKGVTCLSFSKDNNQILSASFNKTIRIHELRSGKLLKELNGHSSFVNDASFTQD
GSHIISASSDGTVKIWNTKSCECIHTFKSLSRTPEVPVNNVIPLPQNPEHFVICNHSNTV
VIMSMHGQTVKTFSSDRKEKADFVCCTLSPHGEWIYCVGEDLVLYCFNYTTGRLQKTLTV
HEKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctgtggagatggagcctgcggatgtgatccgcctgataatgcagtacctcaaggag
aacaacctctacagaacactgaccaccttacaggaggaaaccaccgtctcgctcaacaca
gtggaaagcatcgacagcttcattgcagatataaagagcggccactgggactccgtcctg
ctggccatcaagtccctcaagttgcccgacaacacacttattgacctttatgagcaggtt
gtaatggagctcattgaaatgagggaggtgggagcagcacgctcactcctcagacaaact
gacccgatgatcatgttgaagcagacgcagccagagaggtacatccatttggagaacctg
ctaacatgctcctactttgaccctcgtgaggcgtacctgaaaggtagcagcaaggagaag
cggcgcagggccatagccgaggcgctggtgagggaggtcagcgtggtgcccccttctcgc
ctcatggggctcctgggacaagttggctctatgagaatacagcagtatgcaggtcacgtc
ttccctgacacgaccatcgaaacatctggcaacaaggacaaacatgtggagaaggagagc
tttccaacacagctgtaccgccacatcaagtttgggcggcggtctcatgtggagtgtgcc
cgtttctctcctgatggcaagtacttaatcactggatcggtggacgggttcatcgaggtc
tggaactttaacactggaaaaattagtaaggatttaaagtaccaggcccaagagagcttc
atgatgatggatgatgctgtgttgtgtatgtgcttcagtcaggacacagatctactggca
actggagctcagaatggcaaaataaaggtgtggaatatccagagtggcttgtgcctgtgg
aggttcgatcatgcccacaacaaaggtgtgacttgtctaagcttctccaaggacaacaac
cagatcctcagtgcctcctttaacaagaccatcagaatccatgaattgaggtcaggcaag
ttgctaaaggagttaaacggccattcatcgtttgtaaatgatgcatctttcactcaagat
ggatctcacatcatcagtgcctcctctgatggcacagttaagatttggaatacaaaatcc
tgcgagtgcatccacactttcaaatctctgtcccggacaccagaagtccctgtcaacaac
gtgattcctctaccccaaaatccagagcactttgtgatttgcaaccactccaacacagtg
gtcatcatgagcatgcacggtcagactgtgaagaccttcagctcagacagaaaggaaaag
gccgactttgtgtgctgcaccctgtcaccccacggggagtggatttactgtgtgggagag
gacttggtgctgtactgcttcaactatacgacaggaaggctgcagaaaacgctgaccgta
cacgagaaagatgtaattggcattgctcaccacccacatgagaatctgattgccacatac
agcgaggatggcctcctaaggttatggaaaccttga

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