Sander lucioperca (pikeperch): 116034310
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Entry
116034310 CDS
T07345
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116034310 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116034310 (herc3)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116034310 (herc3)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
HECT type E3
116034310 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
116034310
NCBI-ProteinID:
XP_031132797
Ensembl:
ENSSLUG00000004909
UniProt:
A0A8C9XJ23
LinkDB
All DBs
Position
4:32729905..32765076
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AA seq
1043 aa
AA seq
DB search
MLCWGNAKDGQLGIAMERDPVFEPRNCHVFSGRGLKEIACGGQHSMFLLHDGSVYTCGSN
SCGQLGHNKPGTSPELVGALDAQTITMMSSGRAHSMAVNEQGQVFAWGAGEGGQLGLGTA
EAAVRIPRLVKRLCDHRISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSRLLP
YPLKSLAGIPFAQITTGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVHISCGEEHTAALTKDGGLFTFGEGSWGQLGHGSTNNELLPRRVVELMGSEVSQITC
GRHHTLAFVPSSGVVYAFGCNSHGQLGIGIRGDARSPLPVKACFLTGNVHCTVTKIISGG
DHSFLLYSNDQSYVPPEDFRVINVSKSISPINYERLNSWRLKLMYSTDSSVTKDIIIQLS
STACWNGSFLDESDDTHFKTNPKIPGIDLDSVRKLFETLSKPAFSGLLEQATKSFESMMI
PQLPRSPPDVEAMRIYLILSEYPALMDSKNYIRLTIPLAMAILRLDANPGKVLDNWWYLL
DNSVFTRMVDMYKSIVVFMLTGGKALLVPVFYENYLVATLRLLEKLHQVNLRANHVEYNH
FYIPDITSLVDIQEDYLKWFLSKADIKAGSIPRSQSDLPAVNLCAYPFILNARAKTTMLQ
TDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRDHLVSDTLRELTMYSDVDL
KKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTYYKESNLLWFSDKCFVEQNW
FHLIGIICGLAIYNSTVVDLHFPLVLYKKLLNVPSMLEDFKELSPTEARSLQQLLDYEGG
DVEETFLLNFAITRENYGLTEVKELIPGGESISVDKNNRKEFVEAYLRYVFSDSVSEQYS
AFSSGFLKVCGGDILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPTVRLFWE
VFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNLLDMPRY
QTKEILCRRLTRAVEQYEGFSLV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcaaaggatggacagttgggtattgctatggagagggaccct
gtgtttgagccaaggaactgtcatgtgttcagtggcaggggactgaaagagatagcctgt
ggagggcaacactcaatgttcctgctgcatgatggtagtgtgtacacatgtggttctaac
agctgtggacaactgggccacaacaaaccagggacttccccagagcttgtaggagctctg
gatgctcagacgataacaatgatgtcgagtggtcgggcccattcaatggcagtgaatgaa
cagggtcaagtgtttgcgtggggagctggtgaagggggccagcttggtctggggactgca
gaggcggctgttcgaataccaaggttggttaaaaggctgtgtgaccaccggatctctcaa
gtaatgtgtgggaatcagcactgcattgcactttctagagatggccagctgttcacgtgg
ggccagaacaccagcggtcagctcggtctggggaaaggagaacccagcaggctgctccct
tatcccctgaagtctctggctggtattccctttgcacagataaccaccgggggagaccac
agctttgctctctccttgtccggagctgtatttggttggggcaagaacagagctggacaa
ctgggtctcaatgataaacaagatcgcgccgttccgtgccacatcaaatttttgagatct
caaaaagttgttcacatcagctgtggagaggaacatacagcagccctcacaaaggatggc
ggcttgtttacatttggtgaaggctcgtggggtcagctgggtcatggctccaccaataac
gaacttttacccagacgagtggtggagctcatgggctctgaggtgtcccagatcacctgt
ggcaggcaccacacgttggcctttgtgccttcctctggtgtggtgtatgcgtttggttgt
aacagccatggccagctgggcataggaatacggggggatgctaggagcccattacctgtc
aaggcctgtttcctgactggaaatgtccattgtacagtgaccaaaatcatcagtggagga
gaccatagcttcttattgtactctaatgaccagagttacgtccccccagaagacttcaga
gtgattaatgtcagcaaatcaatctccccaatcaattatgaaagattaaattcatggcgg
ttaaaactgatgtacagcacagattccagtgtcacaaaagacatcataattcaactctcc
tctacggcttgttggaacggcagctttttggatgaaagtgatgatacccacttcaaaacc
aacccaaagatcccaggcatcgatctcgactctgtcagaaagctatttgagacgctaagc
aaaccggctttctctggacttctggagcaggccactaagagttttgagagtatgatgatc
cctcagctgccgcgctctcctcctgatgtcgaggccatgaggatttacctcatcttgtct
gagtacccggccctgatggactccaagaactacatccgcctcactatccccctggcaatg
gccatcctccggctagacgccaaccccggcaaagtattggataactggtggtatttattg
gacaacagtgtgttcaccagaatggtcgacatgtacaagagcatcgttgtgttcatgcta
acgggaggcaaggcgctgctcgtaccggtgttctacgagaactatttagtcgccacgctg
aggctgctggagaaactccaccaggtaaatttaagggccaaccatgtggagtacaaccat
ttttatatccctgacatcaccagcctggtggacatccaggaagactacctcaaatggttt
ctgagtaaagctgacattaaagcgggatcaatcccccgttcacagagtgaccttcccgca
gtgaacttatgtgcctacccgttcatactgaatgctcgagccaagacaaccatgctgcaa
acagacgctgaactgcaaatgcagatggcagtaagcggtgcaaacttacacaatgtattt
atgctgctcacgctggaaccccaccttgctaggaacccttacttggtgctccatgtgcgc
agggaccatttagtaagtgacacactacgtgagctcaccatgtactctgatgtggacctc
aagaaaccgctcaaggtgatctttgatggagaggaggccgtggatgcaggtggagtgact
aaagagttcttcctgctgctgttaaaggagctgatggatcctgtatatgggatgttcact
tattacaaggagtccaacctgctgtggttctcagacaaatgttttgttgagcagaactgg
tttcacctgatcgggatcatctgcggtctggccatctacaactccacagtggtggacctc
cacttcccactcgttctctacaagaagctgctcaatgtgccatcaatgctggaggacttc
aaggagctctcccccaccgaggccaggagtctacaacaacttctggattatgaaggaggt
gatgtggaggagacatttcttctcaactttgctatcaccagagagaactacgggttgaca
gaagtcaaggagctcattcctggaggagagagcatcagtgtggacaaaaacaacaggaag
gagtttgtggaggcctacctgcgctacgtgttctcagactcagtgagcgagcagtactcg
gccttctcctctggcttcctgaaggtgtgcggaggggatatcctgtcgctgttccagccc
tcagagctgatggccatggtggtcggcaacaacaactacaactgggaggagatggaaaag
aatgctgtttacaaaggggaatacacagccactcatccaacagtcagactgttctgggag
gttttccacgagttccctctggagaagaaaaagcagttcttattgttcctgaccggcagc
gaccgtatccccatccacggcatggagagcctgcgtatcgtcatccagtccaccacagcg
gaggagcactacctgccggtggcccacacctgctacaacctgctggacatgccccgctac
cagaccaaagagatcctgtgtcgccgtctcactcgggctgtggagcagtacgagggcttc
agcctggtctga
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integrated database retrieval system
