Sander lucioperca (pikeperch): 116034367
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Entry
116034367 CDS
T07345
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116034367 (arhgef38)
Membrane trafficking [BR:
sluc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116034367 (arhgef38)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
Ovate
Motif
Other DBs
NCBI-GeneID:
116034367
NCBI-ProteinID:
XP_031132903
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Position
4:31442254..31460789
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AA seq
808 aa
AA seq
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MDPNEAGRGEKEKEKEKDKVIKRRNRPVFLRYLERRKTDTIVAEDSAKGDINLGTLVRRC
QSDKTEYSAKLKEKMTPHDLSTPPSPALDPEEVRLRKMNRRAKVIQELVQTEKDYLTDLE
LCIREVVQPLRNLQVVDVDRLFTNTETLCEVSAALLHRLHEAIADPDPEAVVIGEIFIQA
KAALEDVYKIYCYHHDDANMALKSYEKDEETKQQFTTCVLSLKKIYDQEGKPNLLNMGSL
LIKPVQRIMKYPLLLGELWHATPENHPDFQPLQQAYTAAKIINVNINEFKRRKDIVMKYK
RLEDEGTLRGKLHKFNIHSIRKKGDRFAGYLKILTGVEPQVRDEVFDREEKLFRSLEKAV
RQLAKNVQCYLQHTQEMVSVAVQKVQDMEDIIKDTNKNDTNGSLHSNGNDPYKHFKDSME
RLVLVPLSSLQGMFTAPQKLIQKRYDKLLDYCSRLERSSSFSSQSSSSTASSSPSLVSED
PSGPARRDYEALNALLVEELQRFNMAAYTILTNCVVYLVALLRGLMDKILLRVPSIHQLP
APLSNIAEVQNSIMDELNNLTFVKDNAQKLMERKVSFERQRDKKIAMPEVQHQTEEQRAW
LLAEYPLSRLYQLKRKCNGCQEQDLSLLEGELVALLEDTDPLGSSSRWLVHTGGTQGYVY
STFLKQYNPLRDSQRKGQMAKEQQQQQPPAMVDEDFDDLSLFVSGSGSSSLRSFNLNNTD
SSSTLSGLQGEPESPEDLEDTLDTEAQQFYAVYAFQARCDQELTLQEYQHVRIIQFCDLG
GNKDWWLAEANGQKGYVPANYLGRMSYA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaatgaggctggcaggggtgagaaggaaaaggaaaaagagaaggacaaagtg
ataaagaggaggaaccggcctgtgttcctgcgttacctggagaggagaaagacggacact
attgtggctgaggactcggccaaaggtgacatcaacctggggacgctggtgaggaggtgt
cagtctgacaagacggagtacagcgccaaacttaaagagaaaatgacaccacacgacctg
tccacacccccatctccagcactggacccagaggaagtccgtttaaggaagatgaaccgc
agggcaaaggtcattcaggagcttgtgcagactgaaaaggattacctcacagacctggag
ctgtgcatcagagaggtggtccagcctctacgaaatttgcaggttgtggatgtagacagg
ttgttcaccaacacggagacattgtgtgaggtatcggcagcactccttcacaggctgcat
gaggctattgctgaccctgatccagaggcagttgtcataggagaaatattcatccaggca
aaggcagctttagaagatgtatataagatttactgttaccatcatgatgacgccaacatg
gcactcaaatcctacgagaaagatgaagaaacaaaacaacaattcaccacatgtgtatta
tctctgaagaaaatctacgaccaagaagggaaacccaacttgctgaacatgggttcactg
ctcatcaaaccggttcagaggatcatgaagtacccgctgctgctcggggagctgtggcat
gccacacctgaaaaccacccggattttcaaccactgcaacaggcatacactgctgccaag
atcatcaatgttaacatcaatgagttcaagagacgcaaggatatagttatgaagtataag
aggttggaagatgaaggcacattgaggggcaaactacacaagtttaacatccactctatc
cggaagaaaggtgacaggtttgctggctatctcaagatcctcactggagttgaaccacag
gtaagagatgaagtatttgacagagaggagaagctgttcaggagtctggagaaggctgtg
aggcagttggcaaagaatgttcaatgttacctgcagcacactcaggagatggtgtctgtg
gctgttcagaaagtccaggacatggaagacatcattaaggatacaaacaaaaatgacaca
aatggctcattgcacagtaatggaaatgacccctacaagcactttaaagacagtatggag
cgcctcgtcctcgtccctctgtcctccctgcaaggcatgttcacagccccacagaagctc
atccagaagcgttatgacaaattgctggattactgcagccgcctggagcgctcttcctct
ttttcatcccagtcctcgtcatccaccgcttcttcctctccttcactggtgtcagaagac
ccgtctggtcccgccaggagggactatgaagctctcaatgccttgctagtggaggagttg
cagaggttcaacatggccgcctatactatcctgaccaactgtgtggtgtatctagtggcc
ctgctcagagggctgatggataaaatactacttcgtgtcccatccattcatcagctacca
gctccattgtcaaacattgctgaagtgcagaacagcatcatggatgagctgaacaatctg
acttttgtcaaggataacgcacagaagttaatggagcgaaaagtcagcttcgagagacaa
cgagacaagaaaatagcgatgccagaggtgcagcatcaaactgaggaacagcgcgcctgg
ctgctggcagaatacccactgagccgtctgtaccagctgaagaggaagtgtaatggctgc
caggagcaggaccttagcctgctggagggagagctggtagccctgctggaggacacagac
ccattaggcagcagcagccgctggctggttcacactggaggtacccagggctacgtctac
tccacattcctgaaacagtacaaccctctgagggactcccagcgaaaaggccagatggcc
aaagagcagcaacagcagcagccgcctgccatggtggatgaagactttgacgaccttagc
ctgtttgtgtcaggtagtggcagcagcagcctgcgcagctttaacctcaacaacactgac
agcagctcaaccctctctggactacagggggagccagagagccccgaagacctggaggac
acactggacactgaggctcagcagttctatgccgtgtatgcatttcaagcacgctgtgac
caggagctgaccttgcaggagtaccagcatgtccgcatcattcagttctgtgacctggga
ggcaataaggattggtggttagctgaggctaacggacagaagggatatgtccctgccaac
taccttggcaggatgtcctatgcataa
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