Sander lucioperca (pikeperch): 116034587
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Entry
116034587 CDS
T07345
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a
KO
K06757
neurofascin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116034587 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116034587 (nfasca)
Cell adhesion molecules [BR:
sluc04515
]
Immunoglobulin superfamily
L1 family
116034587 (nfasca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
116034587
NCBI-ProteinID:
XP_031133155
Ensembl:
ENSSLUG00000014300
LinkDB
All DBs
Position
6:complement(16241918..16414277)
Genome browser
AA seq
1381 aa
AA seq
DB search
MLGQGGHVALVHLSLLLLLWREAAPIEVPQDPKILQDLKQPPTIVKQSVKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ASNDLGVALSNKILLRVSKAPLWPKEVLEPVGVPEGTPLVLPCNPPPGLPPPFTFWMNSA
MTPIPQDARVSMGLNGDLYFSNVLARDAHTDYSCSARFLFTHTIQQKNPFTLKVLTTEPY
NDTSYNATDPYGGRKVAESTPTFLSPSGSESSKMVLRDEPLLLECIAAGLPTPTIKWFKK
GGDLPWPKVKYENYNKTLKVINMSEEDAGEYVCMANNHLGSIRHSIFVQVKAAPYWLDKP
TNLVLAPDENGRLVCRANGNPKPNIQWLINGEPIDSSPQNPSRQVLGDTIIFRSVQMGSS
AVYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVIENNRTFLECPFFGSPLPDLR
WFKNGQGSGLDGGHYRVYINGTLEIKRARAEDEGTYTCVANSILGSAENQVRLEVKEPTR
IVRAPEHQSVIRGSKAHFDCKVKSDPSLPITVAWTKDDKPLYLGWRLKKDEESLTIPNVN
EGDEGTYTCTVKSEIDQDSASARLTVLDEASLHPSVSSALPPDRPDPPIDLDLSEAAARS
VRLTWIPGNDHRSPITQYLVQFEEDRYEPGRWQDLSTYLGDLNSVILQLAPFVNYQFRVI
AINSVGPGQPSRPSPRYKTSGAAPDAIPRGLRGWGSKKDNMEITWEPLLDLERNGPNLHY
NVWWRRKDLGEEWSNVTTVGSKHVVHNTETYVPYEIKIQARNEFGQGPESNVVIGYSGED
KPTDAPSDLRVSKVDSTKAYIHWKPVDLSSVSGEFKEYRLYYWRESSLVPTLVVSKEKKT
KGFYSIMAEPSGILGDLVPYSKYKMFMVVANNLYEGPRSNTVEISTKEGVPDAPKFFRIN
RRSFDTIHLEWDKPLEPNGILIGYQLKYQTVNGSRVGHPKLETFSPNVTEFTLRLPDRST
RYKFYLSALTQVGAGEVFAEESPHFANEENFTDSTGLVELTDASLASAFSPTPLAPLPPT
TIAPTTISTSTSTTSTTTTATPSTTTTTTEATTIGTPPQLVTIRQSDQNDLGASGREIWN
LTVEPNSNYANVSWRHNFQAGSSEFVLELTLDSKTPDQGGNKTVKHVPRVKPPITLVDLI
AGAVYHLRVYSDDYNSVSSKSVTFKTKPAYIDQVDIATQGWFIGLMCAIALIILILLIVC
FIKRSRGGKYPGAGCLTGFTKYLVRDKKDLPLDPVDQKEDGSFDYHSDEDNKPLQGSQTS
LDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSL
A
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggcggccatgtggccctggttcacctgtcattattgctgctactgtgg
cgcgaagcagcacctattgaagtcccacaagacccaaagatcctgcaagacctaaagcag
ccccccactatagtcaaacagtcagtgaaggactacattgtcgaccccagagataacatc
atcatcgagtgtgaggccaagggcaacccagtgccaacgttctcatggcgaaggaacggg
aagtttttcaacatcgggaaagatcccagggtgacgatgcgaaaacgctcgggaactctg
gagatcggtttccgtagcggtggacgaccagaggactatgagggagagtaccagtgtttc
gccagcaatgacctcggagtggctctgtctaacaaaatcctgctccgggtctccaaggct
cctttgtggcctaaagaggtgctggagccagtgggtgtgcctgaaggcaccccgctggtt
ctaccctgcaaccccccaccgggcctgcctcctccgttcaccttctggatgaacagcgcc
atgactcccatccctcaggatgcaagagtgtccatgggtctgaacggagacctgtacttc
tccaacgttttggccagagacgctcacactgactacagctgcagcgctcgcttccttttc
acacacaccatccagcaaaagaaccccttcacactcaaagttctgaccacggagccgtat
aatgatacatcttacaatgccactgacccctatggtggccgtaaagtagctgagtccacg
ccgaccttcctctccccttcagggagtgagagctccaaaatggtgctacgagatgagcct
ctgctgctggagtgtatcgctgctggacttccgacgcccaccatcaagtggtttaagaag
ggcggggacctgccgtggccaaaagtgaagtatgagaactacaataagaccctgaaggtt
atcaacatgtcagaggaggatgctggggagtatgtatgcatggccaacaatcatttaggc
agcatacgccactccatctttgttcaggtcaaagcggctccttattggctagacaaacct
acaaacctggtgctagcccccgatgagaatgggcgcctggtgtgtcgggccaacggcaac
cctaaacctaacatccagtggctgatcaacggagagcctatagacagctctccacagaac
ccgagcagacaggtgctaggtgacaccatcatttttcgctcggtgcagatgggaagcagc
gctgtgtaccagtgcaacgcctccaatcagcacggctatctgctggccaatgcctttgtc
agcgtcctcgacatgcctccaaggatgctgggccctaaaaaccagctgattaaagtcatc
gagaacaaccgcacctttctggaatgtcctttctttggttcccccctcccggatttacgt
tggtttaagaacggacagggcagtgggctggatggcggtcattaccgtgtttacatcaac
ggcaccctagagatcaaacgggcccgagcagaggacgagggcacctacacctgtgtggcc
aacagcatcctgggctcggccgagaaccaggtccgcctggaggtcaaagagccgactcgc
atagtccgagccccggagcaccagtcagtcatcaggggctccaaggctcactttgactgt
aaggtgaagtctgatcccagtctgcccatcactgtggcctggaccaaggacgacaagccc
ctctacctgggatggagactgaagaaagacgaggagtcgctaaccatccccaatgtgaat
gagggcgatgagggaacgtacacctgcactgttaaatcggagatagaccaggactcagcc
tcagcccgcctcactgtgttagatgaagcctccctccacccctcagtgtctagtgccttg
cctccagaccgtccagaccctcccattgatctggatctgtcagaagctgcagcccgcagc
gttcgcctcacctggatccccggaaatgatcacaggagcccaatcacgcaatacctggtc
cagttcgaggaggatcgctatgagcctggcaggtggcaggacctgtccacttacctcgga
gacctcaactctgtcatcctgcagctcgcccccttcgtcaactaccagttcagggtcatc
gccatcaactcagtgggcccgggtcagcccagccgcccctcaccccggtacaagaccagc
ggagcggccccagatgccattcccagaggtctacgaggatggggatccaagaaagacaat
atggagatcacctgggagcctctgcttgatctggagagaaatggcccaaacctgcactac
aacgtgtggtggagacggaaggatttgggagaggagtggagtaatgtgaccacggtgggg
tccaaacatgttgtccacaacacagaaacctatgtgccttatgagattaagatccaggcc
aggaatgagtttggacaaggacctgagtctaatgtggtcattggatactctggagaggac
aagcccaccgacgctccctctgacctgcgggtgtcaaaggttgacagcaccaaggcatat
atacactggaagcccgtggacctgagctctgtctctggagagttcaaggagtacagattg
tactactggcgcgagtccagtctggttccgactctggtagtcagtaaggagaagaagacc
aagggtttctacagcatcatggccgagccgtctggcatcctgggcgacctggtgccctac
tctaaatacaagatgttcatggttgtggccaacaacctctatgagggcccccgcagcaac
acagtggaaatcagcaccaaggagggagtgccagatgctccgaagttcttccggattaac
cggagaagttttgacacaatccacctagaatgggacaaacctctggagcccaacggcatt
ctgattggataccagcttaagtaccaaacagtcaatggctccagggtgggtcatcccaag
ttggagactttctctcctaatgtgacagagttcaccctgcgcctgccggaccgatctacc
cgctacaagttctatctgtcagcgctcacccaggtgggagcaggggaggtctttgctgag
gagtccccacacttcgccaatgaagaaaactttactgactctacaggtctagtcgagctt
acagacgcctccctggcttcagctttctctcctactcctcttgctcctcttcctcctact
accatcgctcctacaaccattagtacctcaacttctacgacttctactactactactgct
actccttctaccaccaccactacaactgaggcaaccactatcggcacacctcctcagctg
gtcaccatcaggcaaagtgatcagaatgatttgggggccagtgggcgggagatctggaat
ctgacggtggagcctaacagtaactacgctaacgtcagctggagacacaacttccaggcc
ggcagcagcgagtttgtgctagagctcacactggacagtaagacaccagaccaaggaggc
aacaagacggtgaaacatgtaccgcgggtgaaaccccccattacattggtggatctgatc
gcaggtgccgtgtaccatctgagggtttattccgatgattacaacagcgtcagcagcaaa
tctgtcacctttaagaccaaaccagcctacatagaccaggtggatatcgccactcaaggc
tggttcattggcttgatgtgtgccatcgccctcatcatactgatcctcctcattgtctgc
ttcatcaagaggagtcgtgggggcaaatacccaggtgctggttgcttgactggtttcaca
aaatatctagtccgtgacaaaaaagatctccccttggacccagtagatcagaaagaggat
ggatcctttgattaccacagcgatgaggacaacaagcccctccagggcagccagacgtcg
ctggacggcaacgtgaaggagagcgacgacagcctggtggactacggcgaaggcggcgac
ggccagttcaatgaggacggctctttcatcggccagtacacggtgaagaaggacaaggac
gaaacggagggcaatgagagctctgaggccacgtctcctgtcaacgccatctactcgctg
gcgtag
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