Sander lucioperca (pikeperch): 116034590
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Entry
116034590 CDS
T07345
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04382
Cornified envelope formation
sluc04510
Focal adhesion
sluc04512
ECM-receptor interaction
sluc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116034590
04518 Integrin signaling
116034590
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116034590
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116034590
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
CCDC171
DUF948
DUF8567
CCDC18_1st
DUF7121
CCDC39
CCDC18_2nd
DUF1664
F5_F8_type_C
Tropomyosin
DUF745
CLIP1
CEP152_CC1
Motif
Other DBs
NCBI-GeneID:
116034590
NCBI-ProteinID:
XP_031133156
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All DBs
Position
6:complement(16582732..16610139)
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AA seq
1164 aa
AA seq
DB search
MKILLLLAAIAAVSQAQTDCSRGACYPPSSDLLLGRAQQLHASSTCGLAGSEVYCTPYEQ
RRMKCCPCDSRNPNGQLAHTVQDVLSTSGPDRWWQSVKEVNPVTLQLDLGNLFQLDNLVL
SFKGPRPSSFLIERTRDNGRTWQPALYLATDCHKAFPGIPTTAPLTLDQTYCYTLPPTGA
NPYQDHKIQFDPLRQYAYVPASTNQKIEDVSAVTGLRVSLMELGDVPRLPGRALSRFYAL
KEMRVMGSCMCHGHANRCLPEADNNLLTNSIQVNPQCDCQHNTAGVNCERCADLYNDLPW
RPAEEGNTHTCKRCECNNHAQRCQFDQAVFEASGRRSGGVCEGCLHHTTGPKCDQCAPGY
QPNPRSRMDRPDACIRCICSAEGTVNGGQCDDSTGACQCKVNVEGPRCERCKRGYYDLSA
SNPLGCSKCSCSPDGSLSDVCDAMSGQCTCRPHFHGRTCEVCSKGYWKPALTSFCKPCGC
DPTRSYSDTCDQVTGQCQCRPGFGGPTCSECPDNTYGDPLIGCRSCRCDAEGTLPGGCDK
QTGACLCRPGVRGTRCDSCSRGHCDSFPGCETCPSCFFTLDAQRQNLSAALERLSPRFPS
RPGGAGDPGNFGPRILILENSLNLIRDSISLPPSITTQVDNALLQLDKLRNRVDRVNSDL
SPLTTTTGLDSELDRLQALLDNLTLVYKAKKDAKDNSGNQNNAGAFSAIKTAYDESTDAA
KKVIASGDVVKESADARGKTMDLQNQVQPANTRDLDKLNQSMASRPDLTPVAKQVCGSVR
SEPCTPLQCEGGELCPPEGTPPCAKGEKCVGALPLSKRADADAKDVKERLDKLTGKITEA
AEKLQETQDTTNQVRQSAEKLSNRMKQARDELEDDLRETRDVVQDLKDFLSDPSSNLTHI
QEVSDWILKAKLPLSLAALKRKLEELKNLAANLPDSTAVLNQAEPQLDKARKLLQEAQDA
RDTALGVKADVDGLLAGFGSVEDSLSKLEDKLQNSMDLIDNVSNSLTKAEEQLIPAEKAL
DDASALIKPMKPQLDELKELLQNGDQQAQDAQDNADKADDEAAAANKDLLSLEKQLELLK
EKAAASEGTEPLGDRLVKLQQDAGALANTTDNMMKALEGKADSLKGLQDEIVLKSKQLEG
LDAKLKDILGKLRNKAQDLSTCQG
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttttactcctagcagccatagctgcagtctcccaggcccaaactgactgc
tctcggggggcttgttacccacccagcagtgacctgctcctgggcagggcccagcagctc
cacgcctcctccacctgcggcctcgcaggctccgaggtctactgcaccccgtacgaacag
aggaggatgaagtgttgtccatgtgactccaggaacccaaatggtcagctggcccacact
gtccaggatgtcctgtccacatctggaccagacagatggtggcagtctgtgaaagaggtg
aatcccgtcactctccagttggacctgggcaacctgttccagctggacaacctggtgctc
agcttcaagggtccgcgtcccagttcctttctcatagagaggacacgggataatggcagg
acgtggcagcccgctctctacttggctacagactgtcacaaggcttttcctggcatcccc
acaactgcacctctcaccctggaccagacatactgctacacactgccccctactggagca
aacccataccaagatcacaaaatccagtttgatcctttgcgtcagtatgcttatgtgcct
gcttctacaaaccaaaaaattgaagatgtgtctgcggtgacggggctgagggtgagcctg
atggagctcggcgatgtgccgcgtctgccaggcagagctctcagtaggttctacgccctg
aaggagatgagggtgatgggcagctgtatgtgccacggacacgccaaccgatgcctgcca
gaggccgacaacaacctgctgaccaacagcatacaggtgaatcctcagtgtgactgccag
cataacacagccggtgttaactgtgagcgttgtgctgatctctacaacgacctgccctgg
agacccgcagaggagggcaacactcatacctgcaaacgttgtgagtgtaacaaccacgcc
cagcgctgtcaatttgaccaggcagtgtttgaggccagtgggcggaggagcggaggtgtg
tgtgagggttgcctgcaccacaccacagggccaaagtgtgaccagtgtgccccgggctac
cagccaaaccctcgcagccgaatggaccgccccgatgcttgcatacgctgtatctgcagt
gctgaggggacagtaaacgggggccagtgtgacgacagcaccggcgcgtgtcagtgtaaa
gtgaatgtggaaggcccccgctgtgagcgctgtaagagaggctactacgacctgagcgcc
tccaaccctctgggctgctccaagtgttcgtgttccccagacgggtccctgtcagatgtc
tgtgacgcgatgagcggccagtgtacctgtcggccccacttccacggccggacctgtgaa
gtgtgttccaaaggctactggaaaccagcgctgacatcattctgcaaaccctgcggctgt
gaccccaccaggtcatacagtgatacttgtgaccaggtgacaggtcagtgtcagtgcaga
ccaggctttggaggcccaacatgtagcgagtgcccagacaacacatacggagaccctctc
ataggctgccgatcgtgtcgctgtgatgctgaaggaacacttccaggcggttgtgacaag
cagacaggagcctgtttgtgtcggcccggcgtcagaggaacccgctgtgactcctgcagc
cgaggacattgtgactccttccctggctgcgagacctgtccgtcctgcttcttcaccctg
gacgcccagagacagaacctcagtgcagctctggagagactctcccccagattcccttcc
cgtcctggaggggctggtgatcctggaaactttggacctcgcatcctcatcctggagaac
agcctgaacctgatccgggactccatctccctcccccccagtattaccacacaggtcgat
aatgctctgctccaactggacaagctcaggaaccgggtggacagggttaacagtgacctt
tcacccctgacaacaactactggtctggactcggagctggacagactgcaggctctgctg
gacaacctcactctggtgtacaaagccaagaaagatgcaaaggacaactccggcaatcag
aacaatgcaggagcattttctgccatcaagaccgcctacgatgagtctacagatgcagct
aagaaagtaattgccagcggagacgtggtgaaggagtcagctgatgccagaggaaagact
atggaccttcaaaaccaagtccagccagccaacaccagagacctggacaaactgaaccag
agcatggcctcccgacccgacctcactcctgttgccaaacaggtatgtggcagtgttcgc
tcagagccctgcacccctctccagtgtgagggtggagagttgtgtcccccggaaggaacc
ccaccttgtgcaaagggtgagaaatgcgtgggcgccctgcctctgagcaagagggcagac
gctgatgctaaggatgtgaaagagcgactagacaagctgaccgggaagatcacagaggct
gcagagaagctccaggaaacacaggatacaaccaatcaggtgagacagtctgcagagaag
ctgtccaataggatgaagcaggcccgagacgagctagaagacgacttgagagagacgcgt
gacgttgtgcaagacctcaaagatttcctgtcagacccgtcctccaacctgacccacatc
caggaggtgagcgactggatcctgaaagccaaactgcctctcagcctggccgctctgaag
aggaagctggaggagctgaagaatttggcggccaatctcccagacagcacggccgtgttg
aatcaggccgagccgcagctggacaaagccagaaaactgctgcaggaagcacaggatgcc
agggatacagccctgggagtaaaggccgacgtggacgggttgctggcaggcttcggctcg
gtggaggactccctctctaaactggaggacaaactgcagaacagcatggatctcatagac
aacgtgagcaacagcctgactaaggccgaagagcagctgatcccagcagagaaggctctg
gatgatgcatcggcactcataaagccaatgaagccccaactggacgagctcaaagaactg
ctgcagaacggagaccagcaggcccaggatgcacaggacaacgcagacaaagctgacgat
gaagcagctgctgccaataaggacttgttgtctctggagaagcagctggagcttcttaaa
gagaaggctgcagccagtgaagggacggagccgctgggggatcgactggtgaagctgcag
caggatgccggagcgctggccaacaccactgacaacatgatgaaggctctggaaggtaaa
gcagattccctcaaggggctgcaggacgagatcgtactgaagtcaaaacagcttgaagga
ctcgatgctaagcttaaagacattttgggaaaacttcgaaacaaagcccaggacctcagt
acctgccagggctga
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