Sander lucioperca (pikeperch): 116034660
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Entry
116034660 CDS
T07345
Symbol
cnga1b
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
116034660 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116034660 (cnga1b)
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116034660 (cnga1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF2207_C
Sec62
CDC45
FAM60A
DUF2126
RR_TM4-6
PIP5K
Menin
Presenilin
Piezo_TM1-24
ALMT
DUF6474
Motif
Other DBs
NCBI-GeneID:
116034660
NCBI-ProteinID:
XP_031133217
Ensembl:
ENSSLUG00000017163
LinkDB
All DBs
Position
17:705846..718087
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AA seq
649 aa
AA seq
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MAKVGPSVQSLPDMEAEPGEPGEPGEARANQRAGAGALFNVNNSNNNDEEEEKKKKKKEK
KEKKQRKEKKEKEKQEKKERKEKKQKEKEEKEKEKEKEKEKEEKEKKAKEEASKEITVFD
PAGNNYYHWLGVITVPVMYNWTLIIARACFEELQSDYLLLWFLVDLICDVIYIADMYFRT
RTGYLEQGLLVKDEQKLRQRYMVSFQFKLDLISMIPTDLLYFVFGPKYPEIRLNKLFRFN
RMLEFFQRTETRTNYPNALRISNLVMYIVIIIHWNACLYYSFSKAIGFGADRFVYPDPTD
PEFGRLIRKYAYSMYWSTLTLTTIGETPPPVENSEYIFVVTDFLVGVLIFATIVGNVGSM
ITNMNAARATFQARIDAIKQYMTFRKVTTDLEKRVIKWFDFLWTNKKAVDEREVLKYLPD
KLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYII
KEGKLAVVADDGIKQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCLSKD
DLMQALTEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEMEEKVDRMTSELDVLQS
RYARLLAEHEATQSKLKHRVATLERKLRPPLPPPLPLPGDAPPPPTPEA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtaggtccatccgtccagtccctgccagacatggaggcggagccaggtgag
ccaggtgagccaggtgaagccagagccaatcaaagagccggagcaggagctctatttaac
gtcaacaacagcaacaacaacgatgaagaggaggaaaagaagaaaaagaagaaagagaag
aaagagaagaaacagaggaaagagaaaaaggagaaggagaagcaagagaagaaggagagg
aaggagaagaagcagaaggaaaaagaagagaaggagaaggagaaggagaaagagaaggag
aaagaagagaaggagaagaaagccaaggaggaggcttcgaaggagatcacggtgtttgat
ccagcaggtaacaactactaccactggctcggtgtcatcaccgtccccgtcatgtacaac
tggaccctgatcatagccagggcatgtttcgaggagctacagtccgactatttgttacta
tggttcctcgtggacttaatctgcgacgtcatctacatcgctgacatgtacttcagaacg
aggaccggttacctggagcagggtctgctggtgaaggacgagcagaagctgcgtcagcgc
tacatggttagcttccagttcaaactggacctgatctccatgattcccacggacctgctg
tacttcgtcttcggacccaaatacccagaaatccgcctcaacaagctgttcaggtttaac
aggatgctggagttcttccagcggacggagaccaggaccaactaccccaacgctctgcgt
atctccaacctcgtcatgtacatcgtgatcatcatccactggaacgcctgcctctactac
tccttctccaaggccatcggtttcggagccgacaggtttgtgtatcccgacccgacggat
ccagagttcggtcgtctgattaggaagtatgcctacagcatgtactggtccactctaacg
ctcaccaccatcggagagactccgccacccgtggagaactccgagtacatcttcgtcgtc
acagacttcctggtcggtgtgttgatcttcgctacaatcgtcggaaacgttggttcgatg
atcaccaacatgaacgctgccagagcaaccttccaggctcgcatcgacgccatcaaacag
tacatgaccttcagaaaggtaacgacggatctggaaaagcgagtcatcaagtggtttgac
ttcctgtggaccaataagaaagcggtggatgagagggaggtgttgaagtatctgccggac
aaactgagagccgagatcgccatcaacgtccacctggacacgttaaagaaggttcgtatc
tttgcggactgcgaggcggggctgctggtggagctggtgctgaagctgcagccgcaggtc
tacagccccggagactacatctgtaagaagggcgacatcggcagggagatgtacatcatc
aaggagggaaaactggccgttgtcgccgacgacggcatcaagcagtttgtcgtcctgagc
gacggaagctactttggagagatcagcatcctggctatcaaaggaagtaaagcaggaaac
cggaggacggccaacatccggagcatcggctactcggacctgttctgtctgtccaaggac
gacctgatgcaggcgctgacggagtatcctgacgctaaagctctgctggaggagaaggga
cggcagattctcatgaaggacggcctgctggacctggaggtggcggcccagggcccggac
cctaaggaaatggaggagaaggtagaccggatgacgagcgagctggacgtcctgcagtcc
cgctacgcccggctgctggccgagcacgaagccacgcagagcaaactcaagcaccgcgtg
gccacgctggagaggaagctacggccgccgctaccgccgccgctaccgctgccgggtgat
gccccgccccccccgacaccggaggcatag
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