Sander lucioperca (pikeperch): 116034684
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Entry
116034684 CDS
T07345
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04150
mTOR signaling pathway
sluc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116034684 (lrp6)
04150 mTOR signaling pathway
116034684 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116034684 (lrp6)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116034684 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
cEGF
Motif
Other DBs
NCBI-GeneID:
116034684
NCBI-ProteinID:
XP_031133236
Ensembl:
ENSSLUG00000017672
LinkDB
All DBs
Position
20:complement(23050946..23109803)
Genome browser
AA seq
1620 aa
AA seq
DB search
MGMGVVLRSLLLCSFCFLIRGVPLLLYANRRDLRLVDAAHEKANATVVVGGLEDAAAVDY
VYAKGLIYWSDVSEEAIKRTVFNQSGASAAQTVVPGLASPDGLACDWLGSKLYWTDSETN
RIEVAELDGSLRKVLFWQELDQPRAIALDPERGYMYWTDWGEIPKIERAGMDGTNRSMII
DRDIYWPNGLTLDYSQEKLYWADAKHNFIHRANLDGSSREVVVKGELPHPFALTLYEDTL
FWTDWNTHSIHSCRKQTGAEQRVVHSDIFSPMDIHVFSAKRQNILASTLCSVKNGGCSHL
CLLSPVKPFFQCACPTGVQLLGDGKTCRDGATQMLLLARRTDLRRISLDTPDFTDIILQA
EDIRHAIAVDYDPVDGHVYWTDDDVKAIRRSRLDGSDAQFVVTSQVNHPDGIAVDWVARN
LYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADL
DGMERLVMVNTSLGWPNGLALDYDERKLYWGDAKTDKIEVMNMDGTGRRVLVEDKLPHIF
GFTLLGDFIYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATYVHKSSGTNPCAESN
GGCSHLCLYKPLGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAI
PLTGVKEASALDFDITDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLG
KNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRA
AMDGTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGQDREVIADDLPHPF
GLTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACAST
NGHCSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKSAINRMVIDEQQSPD
IILPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVASSLAGPSQGLQL
YDLSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNL
LERSPKIERAALDGTEREVLFFSGLGKPVALAIDNELGKLFWVDSDLRRIESSDLSGANR
IVIADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKTTREGRTKIQARIAYLSDIHAVHE
LDMSEYSKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSC
TSGEVDCIPKAWRCDGYPECDDGSDEENCPVCSESEFQCDSRQCIDLSLRCNGEINCQDR
SDENKCEVRCPPDQFTCSNGQCIGKHKKCDHNMDCTDNSDEIGCYPTEEPPPPSNNTIGS
IVGVVMALFVVGGVYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPASLSSSL
PGMSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRS
QYTMEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKSAVAAA
KGYTSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggggatgggtgtcgtgctgcggagcctgttgttgtgtagtttttgttttctcatacga
ggcgtgccgctgctactgtatgcgaaccggcgggaccttcgtctggtggacgcggcacac
gagaaggccaacgccacggtggtggtgggggggctggaggacgccgcggccgtggactat
gtctacgcgaagggcctcatctactggagcgacgtgagcgaggaggccatcaaacgcacc
gtgttcaaccagtcgggggccagcgcggcgcagacggtggtccccggtctggcctcgcct
gacggactggcctgcgattggctggggagtaaactctactggacggactcggaaaccaat
cgcatcgaggtggccgagctggacggctcgctgaggaaggttctgttctggcaggagctg
gaccagcccagggccatcgctctggaccccgaaagagggtacatgtactggacagactgg
ggtgagatcccaaagatcgagcgggcggggatggacgggaccaatcgctccatgatcatc
gaccgagacatctactggcccaacggtctgactctggactacagccaggagaagctctac
tgggccgacgccaaacacaacttcatccaccgcgccaacctggacgggtcttccagggag
gtggtggttaaaggggagctacctcacccgttcgccctcacgctgtacgaggacaccctg
ttctggaccgactggaacacccactccatccactcctgcaggaaacagacgggcgccgag
caacgcgtcgtccactccgacatcttctcgcccatggacatccacgtcttcagcgccaag
agacaaaacatcctggccagcactctgtgctcggtgaagaatggaggctgttcccacctc
tgtctcctctctccggtgaagcctttctttcagtgcgcctgtcccacgggagtccagctg
ctgggggacggcaagacctgcagagacggcgccacccagatgctgctgttggcgaggcga
accgacctgcggcgcatctctctggacacgcccgacttcacggacatcatcctgcaggcg
gaggacattcgccacgccatcgccgtggactacgaccccgtggacggccacgtgtactgg
acggacgacgacgtgaaggccatccgccgctcgcggctagacggcagcgacgcccagttc
gtggtcacgtcgcaggtcaaccacccggacggcatcgccgtggactgggtcgcccggaac
ctgtactggaccgacaccggcacggaccgcatcgaggtcacgcgcctcaacggcaccatg
cgcaagatcctgatctcagaagacctggacgaaccgcgcgccatcgtactggacccggtc
gccggctacatgtactggacagactggggcgaggtgccaaagatcgagcgggctgacctg
gacgggatggagcgcctggtgatggtcaacacgtcgctgggatggcccaacggtctcgcc
ctcgactacgacgaacgcaaactctactggggcgacgccaagacggacaagatcgaggtg
atgaacatggacgggacaggccgccgtgtcctggtagaggacaagctgccccacatcttc
ggtttcactctgctgggcgacttcatctactggacggactggcagcgccgcagcatcgag
cgcgtccacaaacgcaccgcggagcgggagatcatcatcgaccagctgcccgacctcatg
ggcctcaaggccacctacgtccacaagtcctccggtaccaacccttgtgcagagagcaac
ggaggctgcagccacctgtgtctctacaagccgctgggcgtgcagtgcggctgtcccatc
ggcctggagctcatcgccgacatgcggacctgcatcgtgcccgaggccttcctgctcttc
tcccgacacaccgacatccgtcgcatctccctggagaccaacaacaacaacgtggccatc
ccgctcaccggtgtcaaggaggcctcggcgctcgacttcgacatcaccgacaaccggatc
tactggactgacatcactctgaagaccatcagccgggccttcatgaacggcagcgccttg
gagcacgtggtggagttcggcctggactacccagagggcatggctgtggactggctgggg
aagaacctgtactgggccgacaccggcaccaaccgcatcgaggtggccaaactggacggg
cagcaccggcaggtcctggtctggaaggatctggacagtccgcgcgctctggctctggat
cccgccgaagggtacatgtactggacggagtggggcgggaagccgaagatcgaccgagcg
gcgatggacgggacggggcggatcactctggtggccgacgtgggccgagccaacgggctg
accattgactacgccgagcggcgcctgtactggaccgacctggacaccacgctcatcgaa
tcctccaacatgctcggtcaggaccgcgaggtgatagccgatgaccttcctcacccgttc
ggcctcacccagtaccaggactacatctactggacggactggagccagcgcagcatcgag
cgcgccaacaagaccagcgggcagaaccgcaccgtgatccagggccacctggactacgtc
atggacatcctggtcttccactcgtcccgacagggcggctggaacgcctgcgcctccacc
aacggtcactgctcgcacctctgcctcgccgtgcccgtcagcagcttcgtctgcggctgc
cccgcccacttctccctcaactacgacaacaagacctgcagcgctccgacttccttcctg
ctgttcagtcagaagtcggccatcaaccgcatggtgatcgacgagcagcagagtcccgac
atcatcctgccgatccacagcctgaggaacgtgcgagcgatcgactacgacccgctggac
aaacagctgtactggatcgactccaagcagaacgtcattcgccgcgctcaggaggacgga
aaccagagtatgacggtggtggcgagttctctggccggacccagccaggggctgcagctg
tacgacctgagcatcgacatctacagccgcttcatctactggaccagcgaggtcaccaac
gtcatcaacgtcacgcgcacggacggcagccgagtgggcgtggtgctgagaggagagcac
gacaaacccagagccatcgtcgtcaacccagagagagggtacatgtacttcaccaacctg
ctggagcggtcgccgaagatcgagcgggcggcgctggacgggacggagcgagaggttttg
ttcttcagcggtttggggaaacccgtcgctctggccatcgataacgagctggggaagctg
ttctgggtggactcggacctgcgacgcatcgagagcagcgacctctccggagccaatcgg
atcgtgatcgcagactccaacatcctgcagccggtgggcctgacggtgttcgggaaccac
ctgtactggatcgacaagcagcagcagatgatcgaacgcatcgacaaaaccacgcgggag
gggcgcaccaagatccaggcacgcatcgcctacctcagcgacatccacgccgtccacgag
ctcgacatgagcgagtacagtaaacacccgtgcacctgggacaacggcggctgctcccac
atctgcatcgtgaagggagacgggacgactcgctgctcgtgtcccgtccacctggtgctg
ctgcaggacgagctctcctgtggagagccccccacctgctccccggagcagttctcctgc
acctctggcgaagtcgactgcatcccgaaggcctggaggtgcgacggataccccgagtgt
gacgacggcagcgatgaggagaactgtccagtctgttccgagtcggagttccagtgcgac
agccggcagtgcatcgacctcagcctgcgctgcaacggagagatcaactgccaggaccgc
tcggacgagaacaagtgtgaagtacgctgtcctccagaccagttcacctgctccaacggt
cagtgcatcgggaaacacaagaagtgcgaccacaacatggactgcaccgacaactccgac
gagatcggctgctacccgacagaggagcctcctcctccgtccaacaacaccatcggctcc
attgtgggcgtggtcatggcgctgttcgtggtgggcggcgtgtactttgtgtgccagcgc
gtcctctgtccgcagatgaaggacgacggcgagacggtcaccaacgacttcgtggttcac
gggccgtcgtcggtgccgttgggatacgtcccgcatccggcctcgctgtccagctcgctg
ccaggtatgtccagagggaagtctgtgattggctcgctgagcatcatgggcgggagcagc
gggccgccgtacgaccgcgctcacgtgaccggagcttcgtccagcagctcgtccagcacc
aagggaacctacttccccccgatcctgaatcctcctccgtctccggcgactgtccgctct
cagtacaccatggagtttggttattcctccaacagcccctcaacacacagatcctacagc
taccggccctacacctaccgtcacttcgccccgcccaccaccccctgcagcaccgacgtg
tgcgacagcgactacacgccgggccgccgggcgccgctcaagtcggccgtggccgccgcc
aagggctacaccagcgacctcaactacgactcggagcctttcccgcctccaccgacgcca
cgcagccagtacctgtcggccgaggagaactgcgagagctgccctccatcgccttacacc
gagcgcagctactcgcaccacctctacccgccccccccctcgccgtgcacggactcctcg
tga
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