Sander lucioperca (pikeperch): 116035013
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Entry
116035013 CDS
T07345
Name
(RefSeq) rab GTPase-activating protein 1 isoform X2
KO
K20284
Rab GTPase-activating protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116035013
Membrane trafficking [BR:
sluc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116035013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
116035013
NCBI-ProteinID:
XP_031133748
Ensembl:
ENSSLUG00000025044
LinkDB
All DBs
Position
1:10828345..10899554
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AA seq
1091 aa
AA seq
DB search
MDDKGSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQRELEDVLMEPSVVDTGLRSETGMDSLGGGDHGPLPATVSPVPAGSDPL
SAPPLKLEMVLPVQTAQESELNERSYRADESSSDGSPGSPIQDEDSVVFSQLTYLGCASV
NAPRSEVEALRMMSILRGQCQLPLDVTLSVPGVSEGTVRLLDPNTCTEIANYPIYKILFC
VRGHDGTPESDCFAFTESHYNAEIFRIHVFRCQIQEAVSRILYSFATAFRRSAKKAVLSS
QQPAPLTPDSDLFTFTVSLEIKEDDGKGTFSAVAKDKDKQSFKLRAGMDKKIVIYVQQTS
NKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPKTPQFQPVNE
ETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSKRNYTETFYLKLR
QMERKERKSPSSDTLYEVVSLESETEREKRKTTASPGILPTGTGTTVPSPPEDDEEEDND
EPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPRQLPALVRSGIPEALRGEVWQLL
AGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYS
VYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQLE
RLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNV
ALALLKTSKDDLIQTDFEGALKFFRVPVPKRYRSEENAKKLMELACSIKISQKKLKKFEK
EYHTLREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNAEE
KADALNKELLLTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEYKQ
ICSQLSERLEKQQTANRGELEKIRSKVEGCEKCSSLFNKEGRVRAAVTTAPAGGTEETDE
EKEGLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIK
TVTGSQGKETT
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaaggctcagtggggaagattagcgtgtcttcggactcagtgtccactctc
aacagtgaggactttgtccttgtgtcccggctgggggacgagacaccctcctccactaat
aatggtagtgatgacgaaaagacaggactgaaggtgatttctgaggaaggggtcagcttt
aagattgtggggaatggaagtgagcagcagctccagagagagttagaggatgtcctcatg
gaaccatcggtagtcgacactgggctcagatcagaaacaggaatggacagccttggtggt
ggcgaccatggccctcttcctgctacagtgtcacctgtaccggcaggctctgaccctctg
agcgcaccaccgctcaagttggagatggtgcttcctgttcagacggctcaggagagtgag
ctgaatgagagatcgtaccgagcagatgaatcatcatcagatggcagtcctggcagtccc
atccaagatgaagacagcgttgtgttcagccagctgacatatcttgggtgtgcctcggtc
aacgccccccgcagtgaggtggaggcccttcgtatgatgagtatcctcagagggcagtgc
caactccccctggatgtcacactgtccgtgccaggcgtgtccgaaggcactgtcaggttg
ctggaccccaacacctgtacagagatcgccaactaccctatctacaagattctgttctgt
gtgcgaggccatgatggcacaccagagagtgactgctttgccttcactgagagccactac
aatgctgagatcttcaggatccatgtgttccgctgccaaatccaagaagcggtgagtaga
atactgtacagctttgccacagcgtttcggcggtcagctaagaaggcagttctgtcatct
cagcagcctgctccactcacccctgacagtgacttgtttacctttaccgtcagcctggaa
atcaaagaggatgatggcaagggtactttcagtgctgtagcaaaagacaaggacaagcag
agcttcaagctgcgtgcaggaatggataagaaaattgtcatttatgtccagcagacatcc
aataaggaactggctattgagaggtgtttcggcctcctgctcagcccagggaaaaatgtg
aagaacagcgacatgcacctgctagatctggagtcaatgggaaagagttccgacgggaag
tcttacatcatcacaggaagttggaaccccaaaacgcctcagttccagcctgtgaatgag
gaaacgcccaaagataaattcatgtacatgacgacagcagtggacctggtgatcacagag
gtggaggagccagtccgttttctgctggagacgagggtcagagtctgctccccgaatgac
aggctgttctggcccttcagcaagcgtaactacactgagaccttctaccttaaactacga
cagatggagcgtaaggagcgtaagagtccttcctccgacacactttatgaggtggtgagt
ttggaaagcgagactgagcgagagaaacggaagaccacagctagtcccggcatcctgccc
actgggactggtaccactgtcccttcaccacctgaggatgatgaagaggaagataatgat
gagcctttactcagcgggtcaggtgatgtttccaaggagtgtgcagagaagatcctggag
acctggggggacttattatccaaatggcatttgaacttatcagtgcgtcccaggcagctg
ccagctttggtacggagtggcatccctgaggctctccgtggggaggtgtggcagctcctg
gcaggctgccataacaatgaccaccaggtagaagagtaccgcactcttattacaaaggaa
tcccctcaggacagtgccatcaccagggacattaacaggacattcccagctcatgactac
ttcaaagacactggaggagatggacaagactccctttacaagatctgcaaggcttactct
gtttacgatgaggagattggttactgccagggacaatccttcttggctgctgtgctactg
ctgcacatgccagaggagcaggctttcagtgtgctggtcaaaatcatgtttgattacggg
ctcagggaccttttcaagcagaactttgaagatctgcattgcaagttcttccaacttgag
agactcatgcaggaatatataccagacctgtacaaccatttcctgaatgtgggtctggag
gctcatatgtatgcctctcagtggttcctcaccctcttcacagccaagttccctctttac
atggtcttccacatcattgacctgctactgtgtgagggcatcagtgtgatcttcaatgtg
gccttggcacttctgaagacatcaaaagacgatttgatccaaacagacttcgaaggtgca
ctcaaattctttcgtgtcccggttccaaagaggtaccgctctgaagaaaacgcaaagaaa
ctgatggagctggcctgtagcataaagatcagccagaaaaagctgaagaaatttgagaag
gagtaccacaccttgagggagcagcaggagcaacaggaggccccaatcgagagatatgag
cgggagaaccgtcgtttgcaggaggctaacatgcgtttggagcaggagaatgacgatctg
gcacatgaactagtcagcagcaagatagccctgcgcaaagacctcgacaacgctgaggag
aaggcagacgccctgaataaagagttgctgctgaccaaacagaaactggtggactctgag
gatgagaagagacgactggaggaagaatctgcacagctaaaggagatgtgcagacgagag
cttgataagtctgaatcagagataaagaagaacggctccattattggagaatataagcag
atctgctcccagctgagtgaacgactggagaaacaacagacagccaaccgaggagaactg
gagaaaatccggtccaaagtggaaggctgtgagaagtgcagtagtcttttcaacaaagaa
ggtcgtgtgcgggccgctgtaaccacagcacctgctggggggactgaggagacagatgag
gagaaagagggtttgaagaaccagctgagagagatggagctggaactagctcagaccaaa
ctgcagctggtggaggctgagtgcaaaatccaggacttggagcaccacctgggtctggcc
ctcaacgaagtgcaggctgccaagaaaacctggttcaatcgaacgctcagctctatcaag
accgtgactgggtcccagggcaaggagaccacctaa
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