Sander lucioperca (pikeperch): 116035339
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Entry
116035339 CDS
T07345
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03030
DNA replication
sluc03410
Base excision repair
sluc03420
Nucleotide excision repair
sluc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116035339 (rfc4)
03410 Base excision repair
116035339 (rfc4)
03420 Nucleotide excision repair
116035339 (rfc4)
03430 Mismatch repair
116035339 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116035339 (rfc4)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116035339 (rfc4)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116035339 (rfc4)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116035339 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
116035339 (rfc4)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116035339 (rfc4)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116035339 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
116035339 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
RCF1-5-like_lid
AAA_assoc_2
Gp44_lid
KH_DUF2096_C
DNAX_ATPase_lid
AAA
DUF2096_N
Cdc6_lid
Crinivirus_P26
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
116035339
NCBI-ProteinID:
XP_031134229
LinkDB
All DBs
Position
11:complement(9564537..9579334)
Genome browser
AA seq
209 aa
AA seq
DB search
MTAPAQAALRRTMEKESRTTRFCLICNYISRIIEPLTSRCSKFRFKPLANQIQEERLLEI
CEKENLKYTKESIAELVRVSEGDLRKAITFLQSAARLNVDKEITERAVLEIAGVVPPKMI
DHLLQICFTGTFEKLEVAVRNMVNEGYAATQILSQLHESIIEQDLSDKQKSAITENMAVV
SKCLSDGADEYLQMLSLCSVIMQHASQNN
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaccggctcaggccgctctaaggcggaccatggagaaggagtctcgcaccacc
cgtttctgcctcatctgtaattacatcagcaggattattgagcctctgacctccagatgt
tccaagtttcgcttcaaacctctagccaatcagatccaagaagagcgcctgctggagatc
tgtgagaaggagaacctcaagtacaccaaagagagtattgcagaattggtgagggtgtct
gagggagacctgcgaaaagccataaccttcctccagagtgctgcgcgtctcaacgtcgac
aaggagatcacagagcgagctgtccttgaaatagccggggtcgtccctcccaagatgatt
gaccatttgctccagatatgcttcacaggaacatttgagaagttagaggttgctgtcagg
aacatggtgaatgaaggctatgcagccacacagatcctgagtcagctccatgagtctatc
atagagcaggacctgagtgacaagcagaagtcggccattacggagaatatggcggttgtc
agtaagtgcctgtcagacggtgcagatgagtacctgcagatgttgagtctgtgttcagtc
atcatgcagcatgcctcccagaacaactaa
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