Sander lucioperca (pikeperch): 116035483
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Entry
116035483 CDS
T07345
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03022
Basal transcription factors
sluc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116035483 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
116035483 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116035483 (mnat1)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116035483 (mnat1)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116035483 (mnat1)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116035483 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
TcdA1_RBD_2
zf-RING_2
zf-P11
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
116035483
NCBI-ProteinID:
XP_031134396
Ensembl:
ENSSLUG00000004405
UniProt:
A0A8D0CT36
LinkDB
All DBs
Position
18:complement(12251236..12288186)
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKRDFDFPSLREYNDYLEQLEDIVYNLTNNIEVENTKL
RMEQYQRENRDLIQRNKVKLTREQEELEELLLLEQQGNEQRRLDLLQEEQRQLQAKRKNK
QALLDELEQSQLPATILLAQHKVRAAKLETQIEQQKQAVKPTSLFSTGIHMRQTVSLQPA
PKIEEVLYHYNPLQVETYGPLVPELEQLGRLGYLNHVRAAMPQDTAGGYTSALACHRALQ
DAFSGLFLLKR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaagggtgtccgagatgcaaaacaaccaaatacagaaatccgtcgctgaag
ttgatggtgaacgtctgcggtcacacgctatgtgagaactgtgtggagatgctgtttgtg
cgtggttcgggtaactgtgtgcagtgcgacacgcctctgaggaagagcaacttccgcgtg
cagctcttcgaagacccgaccgttgataaggaggtggagattcgcaagaaggtgctgaag
atatacaacaagagagattttgacttccccagcctgagagaatataacgactaccttgag
caattggaggacatagtgtataacctgacaaacaacattgaggtggagaacaccaagctg
cggatggagcagtaccagagggagaacagagatctcatccagaggaataaggttaaactt
acacgagagcaggaggagctggaggagctgttgttgctggagcagcagggcaatgagcag
cggagactggacttgctgcaggaggagcagaggcagctacaggccaaaaggaagaataag
caggctctgctggatgaactggagcagtctcaacttcctgccaccatcttgcttgcccag
cacaaggtccgcgctgccaagctggagacccagatagagcaacagaagcaggcggtcaaa
cctaccagtttattttcaactggaatccatatgcgccagacggtgtctcttcagcctgct
cctaagatagaggaagttctgtaccactacaacccccttcaagttgaaacctatggcccc
ttagtgcctgaactggagcagctgggcagactcgggtatctgaaccacgtgcgggctgcc
atgcctcaggacacagctggaggatacacctcagctttggcatgtcatcgagctcttcag
gatgctttcagtgggctgttccttctgaaacgctga
DBGET
integrated database retrieval system
