Sander lucioperca (pikeperch): 116035514
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Entry
116035514 CDS
T07345
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04080
Neuroactive ligand-receptor interaction
sluc04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116035514 (thrb)
04081 Hormone signaling
116035514 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116035514 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116035514 (thrb)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116035514 (thrb)
Nuclear receptors [BR:
sluc03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
116035514 (thrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PAP_central
Motif
Other DBs
NCBI-GeneID:
116035514
NCBI-ProteinID:
XP_035849018
Ensembl:
ENSSLUG00000002594
LinkDB
All DBs
Position
16:complement(28732450..28927150)
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AA seq
515 aa
AA seq
DB search
MMNYCIPDMYEMPHSGLGGYSAQGGGEHCMYAAGKGLTGYGPGYGHCEPQPLHHPPCMEQ
AWPPSQHYSCSYAGGPPVFKSEYSSIEIPLSHYHHQPEYFPEIKSDFSHLQWMQGAHQKG
YIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDK
VTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRKEELQKTVWDRQEPT
QEEWELIRMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNEITCNLFYTSDQSAAGVKETK
PEENGQASMVNTPEGNKVDIEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLK
GCCMEIMSLRAAVRYDPESETLTLNGEMAVTREQLKNGGLGVVSDAIFDLGVSLSSFNLD
DSEVALLQAVILLSSDRPGLSSVERIERCQEEFLLAFEHYINYRKHKVAHFWPKLLMKVT
DLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactactgcataccagacatgtatgagatgcctcactctgggctgggaggctac
tcggcgcagggcggtggggaacactgcatgtacgcagcgggcaagggactaaccgggtac
ggacccgggtacggacactgtgaaccccagccactgcaccatccgccctgcatggagcag
gcttggccacccagccagcactactcttgctcgtacgctggtggcccgcctgtgtttaag
agcgagtatagcagcatagagatccctctcagccattaccaccatcagcctgaatatttc
cctgagatcaaatctgacttctcacacctgcagtggatgcagggggcgcaccagaaaggg
tacattccaagttacctggacaaggatgagctatgtgtagtgtgcggggacaaagccaca
ggctatcactatcgctgcattacctgtgaaggttgcaagggtttcttcaggcggacgatt
cagaagaatctcaacccaacctacgcttgtaagtacgaggggaaatgtgtcatcgacaaa
gtgaccagaaaccagtgccaggaatgccgcttcaagaagtgcattgcggtgggcatggcg
accgacttggtgctggacgacagcaagaggctggccaagcggaagctaatcgaggagaac
cgggagcgccgtaggaaggaggagctgcagaagacggtgtgggaccgacaggagcccacc
caggaggagtgggagctgatccgtatggtgacggaggcccacatggccaccaacgcacag
ggcaaccactggaagcagaagcggaaattcctggtcgaggaagctatgcttcttaatgaa
ataacatgtaatttattctatacttctgaccagagtgcagcgggggtgaaggaaactaag
cctgaggagaatggtcaagcgtccatggtcaatacacccgaaggaaacaaagtggatata
gaagccttcagtcagtttacaaaaattatcacccctgccataacccgagtggtggacttt
gccaaaaaactgcctatgttttgtgagctgccttgtgaagaccagatcatcctgttgaaa
ggctgctgcatggagatcatgtcgctgcgagccgcggtccgctacgacccggagagtgag
acgctcacgctcaacggcgagatggcggtcacgcgggagcagctgaagaacggcggcctg
ggcgtggtctcggacgccatctttgacctgggcgtgtcgctgtcctcctttaacctggat
gactctgaggtggctctcctacaggccgtcatcctgctttcatccgatcggccaggcctg
agtagcgtggagcgaattgagcgctgccaggaggagttcctgctggcctttgaacattac
atcaactaccgcaaacacaaagtggcgcatttctggcccaagctgctaatgaaggtgacg
gacctgcggatgatcggcgcctgccacgccagccgattccttcacatgaaagtggagtgt
cccaccgagctattccctcctctcttcctggaggtcttcgaggactga
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