Sander lucioperca (pikeperch): 116035527
Help
Entry
116035527 CDS
T07345
Symbol
arhgef1a
Name
(RefSeq) rho guanine nucleotide exchange factor 1a isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116035527 (arhgef1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116035527 (arhgef1a)
Membrane trafficking [BR:
sluc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116035527 (arhgef1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
C1_2
BRISC_FAM175B_helical
Prok-RING_1
PHD
PHDvar_NSD
PH_13
Motif
Other DBs
NCBI-GeneID:
116035527
NCBI-ProteinID:
XP_031134497
Ensembl:
ENSSLUG00000000752
LinkDB
All DBs
Position
16:7351922..7393309
Genome browser
AA seq
899 aa
AA seq
DB search
MSRVTNLSKLRQERMREINQRNKEREHMREREKVAREREARYSNGHLFTSLTVSGTTLCS
ACNKSITAKEALSCPTCNVTIHNRCRDTLPNCAKMKQRQQKTAPMRNNSLQNVTLRTKTP
GMRERPSSAIYPSDSFRQSLLGSRRGRSSLSLSKSVSTNNITGTLNDDTPLGLRRILSQS
TDSLSFRTRAMSVESLNDDGDNYYTSVLEELELEGQDFKADSWSMAVDNNYLQTHRKNVI
KRQDVIYELIQTELHHMRTLRIMERVFRQGMLDELQLDPCTVHAMFPCLDQLIRIHSHFL
AQLLLRHNSSLQSGSSRNFTIHQLGDILLEQFSGQCADDMRKTYAEFCSRHLKAVKLYKE
LLARDKKFQCFIRRMSRGPLLRCHGVQECILLVTQRISKYPVIVQRILDNTTDDGEEASF
LAQALSMVRELLSSIDQQMEDLEQTQRLQEIQAKLDQRSEAKVRDGGLFKPGELSRRRLV
HEGTLFWKTPGSRLKDTQVLLMTDILVFLQEKDQRYIFPCLDKSPVLSLQNLIVRDIANQ
ERGMFLISDSSPPEMYEFHAASKEEKNIWIRHIQRTVSRCPSREEFPLIETEHKAHLRRL
KAELQQKDREMLELLQERVTLFCELAEVTSGHEGLQPPITRYLFRADTAQAPRAEKLLLD
AITEVDRLSELLLGSSVDIPLPWQHNHMEVVETSDQDLSLNGAQDFFAAKKIYQRLVNLS
VYLHALQGAVIKQDSILELLLQPQDTVAPSAGGVWRPFWRDGGNREANPGSTIGELALLQ
RQHSLLQEELLRLRDAESRFKDSERARAKLEKHVRHMKVCSGNTPASQQLGEQDSQPASL
QPGKEVSTGADTLWASQQPAHQSDGLQDGSDVEVDMTSDDDDGTASESSKDLQDITEEI
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagttaccaatctgtcgaagctgcggcaagagaggatgagggagatcaaccag
cggaataaagagagagagcacatgagggagcgagagaaggtggcaagggagagggaggca
cgttacagcaatggtcacctcttcacctcattgacagtgtcaggaactacactctgttca
gcatgcaacaagagtattactgccaaggaggcgctcagctgccctacatgcaatgtcact
atccataaccgctgtcgagacactttgccaaactgtgccaaaatgaaacagaggcagcag
aagactgccccaatgcggaataactccttgcagaatgttacactgcgcacaaaaactcca
ggaatgcgcgagcgtccaagttcagccatctacccttcggacagcttccgacagtccctg
ctgggatctcgccgtggtcgctccagcctatccctgtccaagagtgtctccacaaacaac
attacagggaccctgaatgacgacactcccctggggctgcgcaggatcctttcccagtcc
acagactccctgagcttcaggaccagagctatgtcagtggagtctctcaatgatgacgga
gacaactactacacttcagtattggaggagttggaactcgagggccaggacttcaaggct
gactcatggagtatggctgtggacaacaattacttgcagacacaccgcaaaaacgtcatc
aagaggcaggatgtcatctatgaactgattcagactgagctgcaccacatgcgaacgctg
cgtatcatggaaagggtgttccggcaaggcatgctggatgagcttcagctagacccgtgc
accgtgcacgccatgttcccctgcctggaccagctgatcaggatacattcccatttcctg
gcacagcttctcctgcggcacaacagcagcctgcagtctggatccagccgcaacttcacc
attcaccagctgggggacatactgctggagcagttttcaggccagtgtgcggacgacatg
cgaaagacctatgctgagttctgcagccgccacttgaaggctgtcaaattgtacaaagaa
ctgctggccagagacaaaaagttccagtgcttcatacggcggatgagtcgtggacccttg
ctacgttgccatggtgttcaggagtgcatcttgttggtgactcagcggatctccaagtat
cctgtcattgttcagcgcattctggacaataccactgatgatggagaagaagcctccttt
cttgcccaggctctctccatggtcagagaacttcttagttcaatagaccaacagatggag
gacctggaacaaacacagcggctgcaagagatccaggccaagctggaccagcggtctgag
gccaaagtaagggatggaggactgttcaagcctggagagttgtcccgccggagacttgtc
catgaagggacccttttctggaaaaccccaggatcccggctcaaagatacacaggtctta
ttgatgacagacatcctggtgtttctgcaggagaaagaccagagatacatctttccatgt
ctggacaagtctccagtactgtcccttcagaacctgatagtgagggacatagccaatcag
gagcgtggtatgttcctcatcagcgactcctctcctcctgagatgtacgaattccatgct
gcctccaaggaggagaagaatatctggatacgccacatccagcgcaccgtcagcaggtgc
ccatcgagagaggagttccccctcatagagactgaacacaaggctcatcttaggagactc
aaagccgagctgcagcagaaggaccgggagatgctggagctcctgcaggagagggtgact
ctgttctgtgagctggcagaggtgacgagtggtcacgagggcctacaacctcccatcact
cgctatctgttcagggcagacaccgcccaagctccgcgcgcagagaaactgctgctggac
gccatcaccgaggtggacaggttgagtgagctcctgctgggttccagcgtggacatccct
ctcccatggcagcacaaccacatggaggtggtagaaaccagtgatcaggatctgtcgctc
aatggagcacaggatttctttgcagcaaagaagatctatcagaggctggtgaatctcagt
gtttatctccatgcacttcagggtgctgtcatcaaacaagactccattttagagctgcta
ctgcagccacaggataccgtggcaccatctgcaggaggagtgtggcgccctttctggaga
gatggtggaaatcgggaggccaatccagggtcgaccatcggggagctggctcttttgcag
agacaacacagcctgttgcaggaggagctgctgaggctgcgggatgccgagagccggttc
aaggacagtgagagagcccgggcaaagctagaaaagcatgtccgacacatgaaggtctgc
agcgggaacacgcctgcttcccagcagctaggggagcaggattctcaacctgcatctctg
cagccaggaaaggaggtctcaactggagctgacaccctgtgggccagccagcaaccagcc
caccaatcagatggccttcaggacggcagtgatgtggaggtagacatgacgtcagatgat
gatgatgggacagcatctgaaagctccaaagatcttcaagatattacagaggagatctga
DBGET
integrated database retrieval system
