Sander lucioperca (pikeperch): 116035528
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Entry
116035528 CDS
T07345
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116035528 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116035528 (rae1)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116035528 (rae1)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116035528 (rae1)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116035528 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_ACSF4
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
NBCH_WD40
ExoI_SH3
Beta-prop_Nup120_160
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
116035528
NCBI-ProteinID:
XP_031134503
Ensembl:
ENSSLUG00000019370
LinkDB
All DBs
Position
6:complement(39349544..39357890)
Genome browser
AA seq
369 aa
AA seq
DB search
MSLFGTTSGFGAGGTGVFGNATTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
LQIAQHDGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLSTVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttgggacaacctccggatttggagcaggagggaccggtgtctttggaaac
gcaacaacagacagccataatcccatgaaggatgttgaagtgacttcgcctccagatgac
agcatcagctgtctggctttcagtccccccaccatgccaggaaacttcctcattggagga
tcctgggccaacgatgtccggtgctgggaggttcaggacaatgggcagactgtccccaaa
gcccaacagatgcacacaggtccagtgctggatgcatgctggagcgatgatgggagtaaa
gtcttcactgcttcttgcgataaaacagccaagatgtgggatcttaacagcaatcaagca
ttgcagattgcacagcatgacggtccgatcaaatcaatccactggataaaagccccgaac
tacagctgcataatgactggcagttgggacaaaacactgaagttctgggacactcgctct
cccaatcccatgatgtctctgcagatgccagagagatgctattgtgcagatgttgtgtac
cccatggcagtggttgccacagctgagagaggcctaatagtgtaccagctggagaaccag
ccctctgaatttcggagaatagactctcctctcaaacatcagcaccgctgtgttgccata
ttcaaggacaagcagaacaagcccactggctttgcactgggaagcatcgaaggccgagtg
gccatccactatatcaaccctccaaacccagccaaagacaacttcacctttaagtgccac
aggtcgaatggaaccaacacgaccactccacaggacatctatgctgtgaatgccatctcc
ttccatcctgtccatggcacactgtctactgtgggctcagatgggcgcttcagcttctgg
gacaaagacgcccgcaccaagttgaagacctcggagcagctcgaccagcccattacggct
tgctgcttcaaccacaatggcaacatctttgcgtatgcttccagttacgactggtcgaag
ggtcatgagtactacaacccccagaaaaagaactacatcttcctaaggaatgctgccgag
gagctgaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system