Sander lucioperca (pikeperch): 116035540
Help
Entry
116035540 CDS
T07345
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
116035540
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
116035540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
EGF_2
EGF_TEN
EGF_MSP1_1
CUSTOS
Motif
Other DBs
NCBI-GeneID:
116035540
NCBI-ProteinID:
XP_031134520
LinkDB
All DBs
Position
18:13927945..14014669
Genome browser
AA seq
2088 aa
AA seq
DB search
MIKMDRAGFAVLMVLTVALGRIGDCHKDTTGGRKEGAGAGRTVWNQQQSRVRSQGHSPRG
PEDGASSKPSEETSPGTSQSRTLVRLPRGTASHGDDRHISKAEPDHAAGASREDLVSAPL
NGALRTARHPGSQQHRIRVNRRQSNKPSFASTRRLVGPNVCGGQQCCSGWALAPGTNRCI
KPDCQPPCQNRGSCSRPQTCVCRSGFQGPRCEEVAPEQVYIRDGGALRRVQPGANPFQKD
QPRRRPSERQAIDTTKVQTPRPATTRQPVTQVRRGPSDSSPQQTGTSRTVKRYPSSTGPI
SSNALPSSNSYANGHGSEHRNWHGHRNGHSNGHSFNIHRPTGDSQLHGQFNNALLPAGAN
LTSNLDRIKIVFTPMLCRRVCSGGRCYNSCEKGDITTVYSETSHQQQQQQQPKNHGFRLF
FCQIPCLNGGRCIGRDLCWCPSNSTGKFCHLPAPPPARPTPHSHKDASHQGPKSPSQSMY
TLPLSNQQVSLHPSLVNVHIQHPPDAEVHIHQVARVQPGQRPATTDGVHSVQQRSQPGNG
HEPTNEHSSRHPHTNGNGNGHVQPHNRQNGHVGRCFQETVDGQCGKPLPGLTKQDDCCGS
VGTSWGLNKCQKCPTKPAYAVIANGQVECSKGFKRMNLTHCQDINECLLPGLCKNAECLN
TKGSYRCTCKPGFMLDADRSHCVSDKAVSDQRAFCYRSVSASTCSLPLAQHITKQICCCS
RVGKAWGPLCDRCPLPGSDHFKEICPAGHGYTYSRSDVQISLRQLEEDDLQSTGVSWEEQ
SPTFPQPPSIQPWLLLPSRPQYPSYPQTPQVPQYPEYPETPQGPRYPLTPQQPLHPSHPA
RETPEHSEDVEILSLPAVVTDSPLKYPETSPDSSIIRPDSKDTNHTDSATGIDKCATTPS
ICGRGKCIPVQTGYTCHCEPGFKLSALQTNCIDVNECDEDPCEGKGRCMNNYGSYTCQCH
SGYSQVITQNRKFCQDINECSMPNKCQNGECVNTEGSYTCECNSGFAKSWRGQCEDVDEC
RDPSSCPNGVCVNSPGSFQCQTCGLGFRPVNERCVDVNECLNQTVCGRGRCVNTKGSYRC
NCFQGYKLSPDHVCQDVDECVLPGVCLHGRCVNLDGTHKCTCNHGYQLTSDSKACEDVNE
CATANVCPAGICINTAGSYTCQNCRPGFGPSADGLRCEDVNECAQDDLCLGGVCANTEGS
YSCTRCKAGYRVSQDRQRCQDVDECQSLSTCANGICLNSEGSYTCENCPTGYRVSYDGEL
CEDIDECVLPTTCPQGTCTNTEGSFTCIVCQPGFRISEDGQQCDDVDECLVANVCLAQLC
LNTPGSYNCRNCGAGLQLSEDGYSCEDVDECQTPGVCPMGVCTNTEGSFSCVSCDPGFTV
APNGLSCEDVNECEDPSQCVGGQCTNTIGSYSCSCPAGLEMVDGTSCRDINECLTIVGIC
GEGDCLNTMGSYTCICPDGYTTIDGRTGCQDVDECSKDKVCIRGECLNTDGSFLCLCEAG
FKFNADTADCEDQNECKEFGSSVCGTWRCENTIGSYRCFMGCQPGLEGEDATDCDIDECV
NETICGNHGFCENTDGSFRCQCDQGYTNLPGDMSKCVDVNECEMSLALCGEALCENFDGS
FLCICPNDNEEFDPITSQCRSLADIDPTPAAPVPPSAPSAEERKECYYNLNDANFCDNVL
SRNTTKQECCCTVGAGWGDNCEIHACPFPGRDDYNQLCPHGSGLLPLPVASTQSLGEQRP
YIDANECEMFGSDICKNGQCSNLFSTYTCYCRSGFYYDNIRLECVDYDECGFGSACEDGA
CVNTAGSFNCFCSPPLVLDSTRRRCIGLNITEETLEPDHDVHMDICWQRLEGYNMCSEPL
QGRRTTYTECCCLYGIAWSGQCAFCPRKNSDDYAVMCNLPRREGTDSLRERPGYEYGLEG
PEDPAEPFVPPYWDSYGSPAGPYDIPEGFNDNDYSVQQPPFRVPISRPRQQQPRPVDSYA
ERYDGFEGLRAEECGILNGCENGRCVRVREGYTCDCFDGYELDLNKMACIDINECEDISD
KVPLCQNGQCTNTEGSYKCTCLPGFVASAEPHKCIPEIPASGLVETGN
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatggaccgtgcgggatttgctgttttgatggttttgactgttgcactgggt
cgaattggtgactgtcacaaggacacaacaggtgggaggaaagagggtgcaggggcaggc
cggacggtctggaaccagcagcaatcccgggtgaggagtcagggtcactcgccaagggga
ccagaggacggtgcttcctccaaaccatccgaagaaacttctcctgggaccagccagtct
aggactctggtccgcttacccaggggcacagcatcccatggggatgacaggcacatatcc
aaagcagaaccagatcatgctgcaggcgcctcccgggaagacctcgtctctgcgccgctg
aatggtgcgctgcgcaccgcaagacacccgggcagccagcagcacagaatcagagtgaac
cgcaggcagagcaacaagcccagctttgccagcacaaggagacttgttgggcctaatgtc
tgtggaggtcagcagtgctgctcaggctgggctttggcaccaggaaccaatcgctgcata
aaacctgactgccagcccccctgccagaaccgtggctcctgcagccggccacagacctgc
gtgtgtcgctcaggcttccaggggccccgctgtgaggaggtggctccagagcaggtgtac
atccgtgatggaggtgccctgaggcgcgttcaaccaggggccaaccctttccagaaagac
caaccacggagaaggccctcagaaaggcaggccatcgatactactaaggtccagacccca
cgacctgcgaccaccagacagcctgtgacccaagtgagacggggaccctcagactcctcc
cctcagcagactgggacatcccgcactgtgaaacgttatccatcatccactgggcctatt
tcctccaacgcgctacccagcagcaacagctacgctaacggccacggcagtgagcacagg
aactggcatggacacagaaatgggcatagcaacgggcactcctttaacattcacaggcct
actggcgacagccagctgcacggacagttcaacaatgcattattaccagcaggggccaac
ctcacctccaacttggaccgcattaagatcgtcttcacacccatgctgtgccgcagggtg
tgcagcggcgggcgctgctacaatagctgtgagaagggagacatcactacggtctacagc
gagacctcgcaccagcagcagcagcagcagcagccgaagaaccacggcttccgactcttc
ttctgtcagataccctgtcttaatggaggccgatgcatcggcagggacctgtgctggtgt
ccatcaaactcaacagggaagttttgccacctgccagccccgcctcctgccagacccacc
cctcacagccacaaggatgccagccaccaaggaccaaaatctccctcacaatccatgtac
actctcccactatccaatcagcaagtgtctctccacccatccttggtgaacgtacacatt
cagcaccctccagatgccgaagtccatatccaccaagtagctcgggttcagcctgggcag
agaccggccaccacagatggggttcactctgtccagcagcgctcccagcctggcaatgga
catgaacccactaatgagcatagcagcaggcacccccacaccaatgggaatgggaatggc
cacgtccaaccgcacaaccgtcagaacggacatgttggaagatgctttcaggaaacagtc
gatggacagtgtggcaagcctctgccaggcctaaccaaacaggatgattgctgtggaagc
gtgggcacctcctggggtctaaacaagtgccaaaagtgtccaaccaaaccagcatatgca
gtaattgcaaatggacaagtggaatgttccaaaggttttaaacggatgaatctcacacac
tgtcaagacatcaatgagtgcctgttgcctgggctctgtaagaacgctgaatgtctcaac
accaaaggaagctacaggtgcacgtgtaaaccaggcttcatgttagacgctgacagaagc
cactgtgtctcggacaaggctgtgtctgaccagagggcattctgctaccgatctgtgtca
gcaagtacatgctctctgccgcttgctcaacacatcaccaagcagatctgctgctgcagc
cgagtgggcaaggcctggggccctttgtgtgatcgctgtcctttgccgggatcagaccat
tttaaggagatctgcccagctggtcacggatacacctactcacgctctgatgtgcagatt
tctctcagacagctggaggaagatgatctgcagagcacaggagtctcatgggaggagcag
agccccactttccctcagcctccatccatccagccctggctgctgctgcctagcaggcca
caataccccagctatccacagacgccacaagtaccccaataccctgagtatcctgagaca
ccacaaggacccaggtaccctctgactccacagcagcctctccatccctcgcacccagcc
agagagacacctgaacattcagaagatgtggaaattctgagcctgccagctgttgtgact
gactcaccactgaaatatccagagacttctccagactcctccatcatcaggccagattca
aaggacacaaaccacacagactcagccacaggtattgacaagtgtgccaccaccccctcc
atatgtggccgtgggaaatgcattcctgtacagaccggctacacctgccactgtgagcca
ggattcaagctcagtgcactgcagaccaactgcattgatgtgaatgagtgtgacgaggac
ccatgtgaagggaagggccgctgtatgaacaactatggctcctatacctgtcaatgccac
agtggctacagccaggtgatcacccagaacaggaagttctgtcaagacattaatgagtgc
agcatgcccaacaagtgtcagaacggtgaatgcgtcaacacagagggatcttacacctgt
gaatgcaacagtggcttcgccaagtcttggagaggccaatgcgaagatgtagatgagtgc
agagatcccagctcctgtcccaacggtgtctgcgtcaatagtcccggctccttccagtgc
cagacctgcggcctggggttcaggcctgtcaatgaaagatgtgtggatgtaaacgagtgc
ttgaaccaaacagtgtgcggtcgtggtaggtgtgtcaacaccaagggctcctataggtgc
aactgtttccaaggttacaagctctcaccagaccacgtttgccaagatgtggatgagtgt
gtgctccctggagtttgtctccacggccgctgtgtcaatctggacggcacccataaatgc
acctgtaaccatggttaccaactcacctcagacagcaaagcctgtgaagatgtcaacgag
tgcgcaactgctaatgtgtgccctgcgggaatttgcatcaacactgcaggttcctacact
tgccagaactgcaggcctgggtttggaccatctgctgatggactgagatgtgaagatgtg
aatgagtgtgcccaggatgacttgtgtcttggtggggtgtgtgccaacacggagggatcc
tactcctgtaccagatgtaaggctggctacagagtgtctcaagaccggcagcggtgtcaa
gatgttgacgagtgccagtctctatctacctgtgccaatgggatctgtctaaactcggaa
ggctcttacacctgtgagaactgccctacagggtacagagtatcatatgacggggagctc
tgtgaagatattgacgagtgtgtgctgcccactacatgcccccagggaacgtgtacaaac
acagagggttccttcacatgtattgtctgtcaacctggtttcagaatatctgaggatgga
caacagtgtgatgatgtggatgagtgcttggtggctaacgtgtgcctggcccagctgtgc
ttgaacaccccaggatcctacaactgcaggaactgtggagccggcctgcaactgtctgag
gatggttacagctgtgaggatgttgacgagtgccagaccccaggtgtgtgccccatgggt
gtttgcaccaacacagagggctccttctcctgcgtgtcctgtgacccaggcttcacagtg
gcacccaacgggctttcatgtgaagatgtgaatgaatgtgaggaccccagccagtgtgtg
ggaggccagtgcaccaacaccatcggttcctatagctgctcctgccccgctggtctggag
atggtggatgggacgtcctgcagagatatcaatgagtgtttaaccattgtggggatctgc
ggagaaggagactgtctgaacactatgggctcctacacatgcatctgtcctgatggatat
accaccatcgatggaaggaccggctgccaagatgtggacgaatgcagtaaagacaaggtg
tgcatccggggcgagtgtcttaacactgatggctctttcttgtgcttgtgtgaggctggc
tttaagttcaacgctgacacggctgactgtgaagaccagaatgagtgcaaggagtttgga
agctcagtgtgtggtacctggcgctgcgaaaacaccatcggctcttaccggtgcttcatg
ggctgccagcctggcctcgagggagaagacgccacagactgtgatattgatgagtgtgtt
aatgaaaccatctgtgggaaccacggcttctgcgagaacacagacggctccttccgctgc
cagtgtgaccaaggctacaccaacctgcccggagacatgagcaaatgtgtcgacgtgaac
gagtgcgagatgagcttggcgctgtgcggggaggccctgtgtgagaacttcgatggcagc
ttcctgtgcatctgccccaacgacaatgaggaatttgatcccatcaccagccagtgccgc
tccctggctgatattgacccgacacccgccgctccagtccctccgtccgctccctcagct
gaggagaggaaagagtgttactataacttgaacgacgccaacttctgcgacaacgtcttg
tctcgcaacaccaccaagcaggagtgctgctgcacggtgggggccggctggggggacaac
tgcgagattcatgcctgtcctttcccaggaagagatgattataaccagttgtgccctcat
ggcagtggattattacccctgcctgttgcctctacacaaagcctgggagaacagcgccct
tacatagatgcaaatgagtgtgagatgtttggatcagacatttgtaagaatggacagtgt
tcgaatctcttttctacctatacctgctactgtcgctctggcttctactatgacaacatc
cggcttgagtgtgtggattacgatgagtgtggatttggaagcgcctgtgaggatggagca
tgtgtgaacacggccgggtctttcaactgtttctgcagtcctccattagtcctggacagc
acacgacggcgctgcattggtctcaacatcacagaagaaactctagagcctgatcacgat
gtgcacatggatatttgctggcagcgtctggaggggtacaacatgtgttcagaacccctc
cagggacgcagaactacatacactgaatgctgctgcctgtatggcatcgcctggagcgga
cagtgtgccttctgtccccggaaaaactctgatgactacgcagtgatgtgcaacctgcct
cggagagaaggcacagacagtctgcgagagaggccaggatacgagtacggtcttgagggg
ccggaggatcctgcggagccttttgttcctccatactgggacagttatggcagccctgca
ggaccctatgacattcctgagggcttcaatgacaatgactacagcgttcaacagccacct
ttccgtgtccccatttctcgaccacggcagcagcagccacgaccggtggattcctatgct
gagcgctacgatggctttgagggtctccgagcggaggaatgtggaatcctgaacgggtgt
gaaaatggccgctgcgttcgtgtgcgagaaggttacacctgcgactgctttgacggttac
gaacttgacctaaacaagatggcctgtatagacataaacgagtgtgaggacatcagcgac
aaggtgcctttgtgtcagaacgggcagtgcaccaacacagaagggtcatacaagtgcacc
tgtttgccgggcttcgtggcctccgcagagccacacaaatgcatcccagagatcccagca
tctgggcttgtggagacaggaaactga
DBGET
integrated database retrieval system
