Sander lucioperca (pikeperch): 116035549
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Entry
116035549 CDS
T07345
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116035549 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116035549 (taf4a)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116035549 (taf4a)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116035549 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
116035549 (taf4a)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116035549 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
116035549
NCBI-ProteinID:
XP_031134563
Ensembl:
ENSSLUG00000019391
LinkDB
All DBs
Position
6:39414668..39427719
Genome browser
AA seq
879 aa
AA seq
DB search
MDASTASTDSTTGHDPGKTLVVSGAVTSLPNHPGKVGSCSVQTFNGSQTINSHNSGSAAP
LVGATVTSVTANSSSTAISVTAVNSGPVMSKGLTSAIMHPSSNSVIQTSLMNSQSVVASA
QSVSQATGPTVTLVRPPMQTAGSGATLNGNNNVSHAVVSNTTGHTGIDIHTPLVNNSQPA
NSLSVSASHIIKAEPPTTVIQSPPQPAVTPGAVSAPRILSTVAAGPGGIRALPPQMLAPR
LPQTPSGQPSIHNIQLPPGMVLVRSESGQLLMIPQQALAQMQAQAQGGMAPRTATPTSVP
PGQAPGNTIISRQVAPSTIIRQGCPAPTSTAATTTLHRPPILQSSVGAAVPGTPRTVSQT
AGTTVSSVTVSKETVENVTKCKNFLSTLIKLASTGKQSTETAAIVRELVKDLLEGRLEAE
EFTSRLYKELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQLPQPASGPVPSTSPIP
TTVVLGSPAPRLTAPVSRPQLPPGISKPGQTAALVIQLQQQRAMLRPQVALPTTPMVTLR
NQAPGRIMLGQQHVQLKELQPLPVRPEVPHVSKQVSAASLTQAQKNKLKEAGGTFKDDDD
INDVASMAGVNLSEESANILATNSGIVGAVTHSCKDEAFLSYAILQRRMQEIGETLTTLL
TIQHLSIPLKPQDASVSSPGSRYGVTELGAEVVNLVSHATQQRLQNLLGRVSEVAQQKNG
TFKEDDKYEQISDVRAQLKFFEQLDQLEKQRKEEQEREILLKAAKSRARQEDPEQLRLKQ
KAKEMQQQELAQMRQREANLTALAAIGPRKKRKILDSPSSSAAAEGSGTGPSLSGGAAGS
GSRPTRQRITRVNLRDLLFCLENERFTSHSHFLYKGFLK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatcgacggccagcacggactccactacgggacacgaccctggcaaaacactt
gttgttagtggcgctgtaacttctctccctaatcacccggggaaagtaggctcatgctca
gtgcagactttcaacgggagccaaactataaactctcacaattcaggaagcgctgcccct
ctcgtgggggcgacggtgacaagtgtcactgctaacagcagcagtactgcgatatctgtc
acagctgtcaacagtggaccagtgatgtcaaaagggctgacaagtgcaataatgcacccg
tcgtcaaacagtgtaattcagacgtctctcatgaactcgcagagtgttgtcgcttcagct
cagtctgtgagccaggcaacgggacccactgtgacactcgtcaggccgcctatgcaaacc
gcgggctcgggtgcaactttgaatgggaacaataatgtgagccatgctgtggtttccaat
acaacaggtcacacaggtatcgacatacacactccgcttgttaataacagccagccggcc
aactcgttgtctgtcagcgcatcacacataatcaaggcagagccacccacaacagtaata
cagtcaccaccgcagccagcggtcactcctggcgcagtcagcgctccccggattctgtct
acggtagctgccggtccaggcgggatacgagccctgccgcctcagatgttagccccaaga
ctcccccagacgccctcgggacagcccagtatacataacatccagctccccccgggaatg
gtgcttgtacgcagtgagagcggacagctgctgatgattcctcagcaggctctggcccag
atgcaagcccaggctcagggaggcatggcacctcggactgccacaccaacaagtgtgcct
cctggccaagctcctggaaacaccatcattagcagacaagtggctcccagcaccattatc
cgtcaaggctgtccagccccaacgtcaactgctgcgaccaccactcttcatagacctcct
atccttcagagctcagttggggctgcagtaccaggaactcccaggactgtcagccaaaca
gctgggaccacagtatcctcagtaacagtgagcaaagagacagtggagaatgtgacaaaa
tgtaagaacttcctgtctacactgatcaagctagcatcaactgggaagcaatctacagag
actgcagccattgtgagagagctggtcaaggacctgctggagggcagactggaagctgaa
gaattcaccagcagattgtacaaagagctcaattcttcaccccaaccttaccttgtgcct
ttcctcaagagaagcctcccagccttgaggcagctcaccccagactcagcagccttcatc
cagcagagtcagctcccccagccagcctcaggtccagtcccctccacctcacccattccc
accacggtggtcctgggcagcccagcaccccgcctcactgccccagtcagtaggccccag
ctcccaccaggcattagcaaaccaggacagaccgccgcactggttatccagcttcagcag
cagagagcaatgttgagacctcaggtagccttaccgacaacccccatggtgactctcaga
aatcaggctcctggccgcatcatgctgggacagcaacacgtccagctaaaagagctgcag
ccacttcctgtgaggccggaggtgccacatgtttctaaacaagtgtctgctgcatccttg
acccaggctcaaaagaacaagctgaaagaggctggtggcactttcaaagatgatgacgac
atcaacgatgtggcctccatggctggagtgaacttatcagaggaaagcgctaatatccta
gcaaccaattctggaatagtgggagcggtgacacattcctgtaaggacgaggctttcctc
tcctatgccattctacagaggagaatgcaggagataggtgagacacttacaactttgttg
acaatacagcatctatccatccccctaaagccccaagacgcctctgtttcttctccaggt
agtaggtacggtgtgacagagctgggtgcggaggtggtgaaccttgtctcccacgctact
cagcagcggcttcagaacctgctggggagagtttctgaagtggctcagcagaaaaacgga
actttcaaggaggatgacaaatatgagcagatcagtgatgttcgcgctcagctcaagttc
tttgagcagctggaccagctagaaaaacaacggaaggaggaacaggagagagagatcctc
ctaaaggcagctaagtctcgagctcggcaagaggacccagagcagctgcgtctgaaacag
aaggcaaaagagatgcagcagcaggagctggctcagatgagacagagggaggccaacctg
acggcgttggcagccatcggtcccaggaagaagaggaagattctggactctccatcttcc
tctgctgcagctgagggatcaggaacaggtccctctctgtctggtggggctgctgggtct
ggctccagacccacacggcagcgcatcacacgtgtcaatctcagggacctgctcttctgt
ttggagaacgagagatttaccagtcactcccatttcctctacaaaggctttctcaaatag
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integrated database retrieval system
