KEGG   Sander lucioperca (pikeperch): 116035712
Entry
116035712         CDS       T07345                                 
Name
(RefSeq) replication protein A 32 kDa subunit-like isoform X1
  KO
K10739  replication factor A2
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03030  DNA replication
sluc03420  Nucleotide excision repair
sluc03430  Mismatch repair
sluc03440  Homologous recombination
sluc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116035712
   03420 Nucleotide excision repair
    116035712
   03430 Mismatch repair
    116035712
   03440 Homologous recombination
    116035712
   03460 Fanconi anemia pathway
    116035712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sluc03032]
    116035712
   03400 DNA repair and recombination proteins [BR:sluc03400]
    116035712
DNA replication proteins [BR:sluc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    116035712
DNA repair and recombination proteins [BR:sluc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     116035712
   MMR (mismatch excision repair)
     116035712
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     116035712
SSDB
Motif
Pfam: RPA_C RMI2 CofD
Other DBs
NCBI-GeneID: 116035712
NCBI-ProteinID: XP_031134855
Ensembl: ENSSLUG00000002384
LinkDB
Position
16:complement(28342161..28355572)
AA seq 249 aa
MWNQACSQPSDGMPSHKATVMDSFSLMLPQRTTLLILPCTVSQLLSASRGSDRTFTICNW
ELNQVSVVGIIRGSAPFVTNIQYSVDDMTGPPLNVKQWVNTEACASPGTYVKVTGTLRSL
DGQRSLLAMDIRCIKDLNEITSHMLEVVRAHMQLFGKAFDVNMNTTVVSHGGNEHPKGVL
PNGLSTIQGQVMHVIRRFSVSDIGIGFHELQSQLNYLSMGDLRASLTFLINEGHVFSTID
EHHFKSTEH
NT seq 750 nt   +upstreamnt  +downstreamnt
atgtggaaccaagcttgcagtcagccctcggatgggatgcccagccacaaagcaactgta
atggattccttctccctgatgttgccacagaggacaactcttctgattttgccatgcaca
gtgtctcagctgctgtctgcctctcggggcagcgacagaacctttacaatctgcaactgg
gaactcaaccaggtgtctgtagtgggcatcatccgaggatcggctccctttgtgacaaac
atccagtactctgtggatgacatgactggtccacctttaaatgtgaagcagtgggttaac
acagaggcctgtgcttctcctggaacgtatgtgaaggtgaccggaaccctacgcagtttg
gatggtcaaagatcattgttggcaatggacattcgttgtatcaaggacctcaatgagatt
acgtcccacatgttggaagtagtacgagcacacatgcagctttttggaaaggcatttgat
gtgaatatgaataccactgtcgtcagccatggtggcaatgaacatcctaaaggtgtctta
ccaaatggtttgtccaccatccagggtcaggtgatgcatgtgatccggaggttctctgtc
agcgatattggcatcgggttccatgaactgcagtcccagctgaactacctcagcatggga
gacctcagagcgtccctgacgtttctgataaatgaaggccatgtcttctctaccattgat
gagcatcatttcaagtcaacagaacattag

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