Sander lucioperca (pikeperch): 116035774
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Entry
116035774 CDS
T07345
Symbol
sox11a
Name
(RefSeq) transcription factor SOX-11a
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116035774 (sox11a)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116035774 (sox11a)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4718
Motif
Other DBs
NCBI-GeneID:
116035774
NCBI-ProteinID:
XP_031134953
Ensembl:
ENSSLUG00000013861
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All DBs
Position
18:11019233..11022398
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AA seq
368 aa
AA seq
DB search
MVQHTDNSETDGSMSREATDSEESEFMACSPVAINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSKSSAPSPEKCGKIAKTPSKKCSKIKTKIGSKSSHGYGEDCVFPILKVTKTVKSE
LTDEDDDDDYEEDYRMGIKTEDEERMRPYNVAKVPASPTLSSSAESEGTSMYEEVRNNNN
RLFYNIKNITKQSTLHAASVSPASSRSVSTSSSSSSSSSSSSSSSGEDADDLLFDFSLNF
APSAPGSELGNPNSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEAN
FSDLVFTY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacacagacaacagcgagacggacgggagcatgtccagggaggctaccgat
tcggaggagagtgaatttatggcatgcagccccgtagcgataaacccggactggtgcaag
acagccaccggtcacatcaaaagacccatgaatgcatttatggtgtggtccaaaatcgag
aggagaaagatcatggagcagtcgccggacatgcacaacgcggagatttccaagcgcctg
gggaagaggtggaagatgctgaaggacagtgaaaagatcccgtttatcagagaagccgag
aggctgcggctaaaacacatggctgactaccccgactacaagtacagacccaagaaaaaa
ccaaagctcgacagttcaaaatcatcagcaccgtctccggagaagtgcggtaaaattgca
aagactcccagcaagaagtgttcaaagataaagactaagatcggctccaaatcctctcac
ggctacggggaggactgtgtgtttcccatcttaaaagttacaaagactgtgaaaagtgag
ctcaccgatgaggacgatgatgacgactacgaagaggactaccggatggggattaagacg
gaggacgaggagcgcatgaggccgtacaatgtagccaaagttcccgcgagcccaactttg
agctcctcggccgagtccgaggggacgagcatgtatgaagaagtgcggaacaacaacaac
agactcttttacaatatcaaaaacattaccaagcagagcacattgcacgctgcttctgtc
tcaccagcatcctccaggtcggtctccacatcctcttcctcctcctcctcctcctccagc
agcagctcctcttccggcgaggacgcggacgatttgctgtttgactttagtttaaatttc
gcccccagcgccccaggctcggagctgggcaaccccaattcaggaaacctctccctgtct
cttgtggataaggacctggactctttcagtgagggcagccttggctctcactttgaattc
ccagactattgcacgccagaactcagtgagatgattgccggggactggctggaggcgaac
ttttccgacctggtctttacatactga
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