Sander lucioperca (pikeperch): 116035821
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Entry
116035821 CDS
T07345
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116035821 (rtn1a)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116035821 (rtn1a)
Membrane trafficking [BR:
sluc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116035821 (rtn1a)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116035821 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
DUF4736
Motif
Other DBs
NCBI-GeneID:
116035821
NCBI-ProteinID:
XP_031135008
Ensembl:
ENSSLUG00000004149
LinkDB
All DBs
Position
18:12405839..12425891
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AA seq
728 aa
AA seq
DB search
MSTQPGEELGSEGRWFGDDYERNGLFGNTQSRFDELREEFKPRGGEVAGDLDQQFHLFQD
DGKRPPVAMETASTDDPMSGLFRKPMNDDGDVYTSLMSNQSFTSGREASYLSDDLKSSKP
SSGSSGLDHFSSDTYSFSSNTKMTSDLADDMPKSLFGSDKTESYNYMDINYGDERRDQHS
LVDTGSTGHDSLVSYMDKNHGRDEEEEEENLGPALGSHSFPYVEEPSDEELSDYRSYRNL
GGTPQTASPVKITLTESQPPTAKTEPLQHPPPVSVPDRENVLSVGLQGVPTVTLSEPEDD
SPASTPNASPTQKEFTSQDMFKADTVKPAASKSSPSTKAGSREQDGSSAESGDSEIELVS
EEPPKATSNPFAQPPKSKGTSSQPNNPFDNPPVAKGGFGLAGNHAPPTAYSILREEREAE
LDSDLFIESASEESPKREQGFSGPKQGVSPPSPLVPSATPPCSTAEAMPAEPLITEKVKT
PVKIEEDRPSKPKPPTAAVPPEVRSERPHQDDMHKHTNEGKGDLGKPAASTILQGFDKQK
AIDLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYKSVLQAV
QKTDEGHPFKAYLEIEIALSQDQISKYADKILLYTNTCMKELRRLFLVQDLIDSLKFAVL
MWLLTYVGALFNGLTLLILAVVSMFTMPVVYEKHQAQIDQYVGLIRTQVNSVVGKIQAKI
PGAKRKEE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtctactcagcccggtgaggagctaggctcggaggggaggtggtttggggatgactat
gagagaaacggcctgtttggtaacacacagagccggtttgacgagctacgtgaagaattt
aagccgagaggcggcgaggtggcgggcgacctggatcaacaatttcatcttttccaggac
gacgggaaaaggcctcccgttgctatggaaactgcatctacagatgaccccatgtccggc
ctgtttaggaagcctatgaatgatgatggtgatgtctacacttccctgatgtcaaatcag
agcttcacatcgggtcgagaagcctcctacctgtcggacgacctgaaatcgtccaagccc
tcctctggctcctctggcctggatcacttctccagcgacacctatagcttcagctccaac
accaagatgacttccgacctggctgatgacatgccaaaatctctgtttggctcagataag
acagaatcctacaactacatggacatcaactatggggatgagcgccgtgaccagcacagc
ctggtggacacaggctcaactggtcatgactcattggtcagctacatggataaaaaccat
ggaagagatgaggaggaggaagaggaaaacctaggtccagcactgggctcccactccttc
ccgtacgtggaggagccatctgatgaagagctgtcagactaccgctcctaccgaaacctg
ggtggcaccccacagacggccagcccagtgaagatcaccttgaccgagtcccagcctcca
actgccaaaactgagccgctgcaacatccccctccagtcagtgtgcctgatcgtgaaaac
gtcctcagtgtgggcttacagggggttccaactgtgacgctatcagagccagaggatgac
agccctgcttccactcccaatgcttcaccaacacaaaaagaattcacttcccaggatatg
ttcaaggctgacacagtgaagcctgcagcttccaaaagcagtccaagcacaaaggcaggc
agcagggagcaagatggcagcagcgcagagtctggagactcagagattgagctggtgtct
gaggagcctccaaaggccactagcaacccatttgcccagccgcctaaaagcaagggcact
tccagccagcctaacaacccctttgacaatcccccagtcgccaagggtggtttcggccta
gcaggcaaccacgctccacccacagcctacagcattctgagggaggagagagaggcagag
cttgacagtgatctcttcattgagtctgcgtctgaagagagcccaaagagagagcagggc
ttcagtggccccaaacagggagtcagccctccttctcccctggttcccagtgccacccct
ccctgcagtacggctgaggcaatgccagccgagcccctgatcacagaaaaggtcaagacc
ccagtgaaaatagaggaggatcgccccagcaagcccaaaccacccactgctgctgtgccc
ccagaggtgcgatcagagaggccccaccaggacgacatgcacaagcacaccaatgagggc
aaaggagatctgggaaaacctgccgcctcaaccatcctgcagggctttgataagcaaaaa
gcgattgacctgctctactggaggaatgtgaagcagtcgggggccgtgttcagcagcgtg
cttctgctcctcttctccctgacccagttcagcgtggtcagcgtcggcgcctacttagcc
ttggcagccctctctgctaccatcagcttcaggatctacaagtctgtgctgcaggctgtg
cagaagaccgatgagggacatcctttcaaagcctacctggagatcgaaatcgctctttcc
caggaccagattagtaaatatgccgacaaaatcctgctgtataccaacacctgtatgaag
gagctccgcaggctgttcctcgtacaagacctgatcgactccttgaagtttgctgttttg
atgtggctgctgacctacgtgggtgctctcttcaacggcctgacactgctcatcctagct
gtggtctccatgttcaccatgcctgtggtctatgagaaacatcaggcacagattgatcag
tatgtgggactaatacggacccaggtcaactctgtggtggggaagatccaagcgaagatc
cctggggccaagaggaaggaggagtag
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