Sander lucioperca (pikeperch): 116035832
Help
Entry
116035832 CDS
T07345
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116035832 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sluc01007
]
116035832 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116035832 (vars2)
Enzymes [BR:
sluc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
116035832 (vars2)
Amino acid related enzymes [BR:
sluc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116035832 (vars2)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116035832 (vars2)
Prokaryotic type
116035832 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
HrpB7
Motif
Other DBs
NCBI-GeneID:
116035832
NCBI-ProteinID:
XP_031135030
Ensembl:
ENSSLUG00000000161
LinkDB
All DBs
Position
16:7843500..7900088
Genome browser
AA seq
1082 aa
AA seq
DB search
MWRAGRVLSWRLPGEGAARLCFGIPPKPSSSSQSNSSPRPKAEKLRRRREREEAILSSQH
STAEDKAVKWSEKQKIVYTTPTPAGTKKDTSSLFPSSYSPEYVESSWYQWWEKEGFFRPE
QHERLSHSVDQTFSLCIPPPNVTGTLHLGHALTVAVEDVLVRRRRMQGYRVLWLPGCDHA
GIATQTVVERRLLKEGGKHRQDFTRQEFLREVWKWKNEKGEEIYQQLRALGASLDWSRAC
FTMDPGFSRAVTEAFVRLCDSGLIYRSEALVNWSCALESAISDIEVDSKELSGQTMLSVP
GYENKVEFGTMLTFAYPIEGHDGEVAVSTTRPETMLGDVAVAVHPDDPRYQAVHGKQCRH
PFTDRLLPIIADSMVDMELGTGAVKVTPAHDHTDFLLSQRHSLPRLTVIGGDGTMTPSCG
QWLQGVKRFDARQLVVDALVEKKLFRGKKDHAMTLPVCSRSGDIIEPLLKKQWFLRCDEM
AKKAIQAVEDRQLEIIPHYYTKTWKNWLSNISDWCISRQLWWGHQIPAYRVELPNSADKQ
EEHWVWGQSEDEARQRAAVRYGVKPEDITLTQDPDVLDTWFSSGLFPFAMLGWPEQTTDL
QRFYPNSILETGSDLIFFWVARMVMLGTELTGQLPFKQVLLHSLVRDKHGRKMSKSLGNV
IDPLDVIHGVSLERLQEKVKEGNLDPREQLVAMEAQRKDFPTGIPQCGTDALRFALCSHK
MQGEDISLSISQVLSCRHFCNKMWQALRFTLGVLGANTTPVATLEETCAVSSMERWICSR
LYSTVVQCEQAFEAYELHTVTSALYSFWVHSLCDVYMECVKPVLVQRQDGGAVVQTDTEP
SVRARQVASSVLYHCVSMSLALLSPFMPFITEELWQRLQPRGPGAAAPPSALCLQPYPCS
SQLAHWHFPEEERDFLLVQEVIRVARSLRSQCRMTKEKPAMWAVCSPGQAQILLHFGSAV
RTLSRISSLHIHCPQRADLFSVHSTPPPEGSLIGVVDHTCQLHLHIQSGMNIENQMVQLS
QRRDKLVPKLEKILGRVQSPDYLTKVPAHVRQQMDTKMSALQQELESVEEQLRVLQETQT
SP
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggcaggtcgtgtcctgagttggaggctgccaggagaaggagcagctagactt
tgtttcggcatcccgcccaaaccttcctcctcttcccagtccaactcctctccccggccc
aaagcagagaaactgaggcgtagacgagagcgggaggaggccatactttcaagtcaacat
agtactgctgaagataaagctgtgaaatggagcgagaagcagaagatcgtgtacactact
ccaacccctgctgggacaaagaaagacaccagttcgctgttcccttcctcgtatagtcca
gagtatgtggagtccagctggtatcagtggtgggagaaagagggattcttccgtccagag
caacatgagagattatctcactctgtggaccagaccttctccctgtgtatccctccaccc
aacgtgacgggcactctgcacctgggccacgctctcactgtggctgtggaagacgtgctg
gtacggaggagaaggatgcagggctaccgagtgctgtggctgcctggatgcgaccatgca
gggattgcaacacagacggtggtggagcggaggctgctgaaagaaggagggaagcacaga
caggacttcaccaggcaggagtttctacgtgaggtgtggaaatggaagaatgagaaaggg
gaggagatctaccagcagctgagggcgctgggagcctctctggactggagccgagcctgt
ttcaccatggatccaggcttcagcagggcggtgacggaggcctttgtgaggctgtgtgac
tcgggtctgatttatcgctcggaggcgttggtcaactggagctgtgctctggaatctgcc
atctctgacatcgaggttgactcaaaggagctgtctgggcagaccatgttgtctgttcct
ggttatgaaaacaaggtggagtttggaaccatgcttacctttgcataccctatagaaggc
cacgatggcgaggtggcagtgtccaccacccgtcctgagactatgctgggagatgtggct
gtagctgtccaccctgacgaccctcgctatcaggctgttcatgggaagcagtgcagacac
cccttcaccgacagactcctgcccatcatcgctgactccatggtggacatggagctagga
actggtgcagtgaaggtgacccccgctcatgaccacactgacttcctgctgtcacagaga
cactcactgccacgccttactgtgattggtggagacgggaccatgacgccctcctgtgga
cagtggctgcagggagtgaagcgttttgatgccagacagctcgttgtggatgctctggtt
gagaagaagctgttcagaggaaagaaggaccacgccatgactttacccgtctgcagccgc
tcaggagacatcattgagccccttctgaagaagcagtggttccttcgctgtgatgaaatg
gctaaaaaagctatacaggctgtggaggacagacagctggaaatcatccctcactactac
accaagacatggaagaactggctgtccaacatcagtgattggtgcatttccaggcagctt
tggtggggtcatcagatccctgcgtaccgagtggagcttcctaattctgctgacaaacaa
gaggagcactgggtatggggacaaagcgaggacgaggcccgacaaagagctgctgtcaga
tatggagtgaagccagaagacatcactttgacccaggaccctgatgtgctggatacgtgg
ttctcctctgggctgtttcccttcgccatgctgggctggccggagcagaccactgacctt
cagcgcttctaccccaattctattctggagacgggcagtgacctcatcttcttctgggtg
gcgagaatggtgatgctgggcacagagctgactggacagctgccctttaaacaggtcctc
cttcactctctggtgagagataaacatggcaggaaaatgagtaaatctctggggaatgtc
attgacccattagatgttatacatggagtctctctggagagactccaagagaaagtgaag
gaggggaacctggaccccagggagcagctggttgccatggaagcgcagaggaaggacttc
cccacagggatccctcagtgtgggactgatgctctgagatttgccctttgctctcacaag
atgcagggagaagacatcagtctgtccatctctcaggtcctgagctgcagacacttttgt
aacaagatgtggcaggcactgagattcacactgggagtactgggtgctaacacaacccca
gtggcaacactggaagagacgtgtgcagtgagcagcatggagcgctggatctgctccaga
ctctacagtactgtggttcagtgtgagcaggccttcgaggcctacgagctgcacacggtc
acatctgcgctgtactccttctgggtccacagcctgtgtgacgtctacatggagtgtgtg
aagccagtgctggtccagcggcaggatgggggggccgtggtccagacggacacagagccc
agtgtccgagccaggcaggtggccagtagtgtcctctaccactgtgtgtccatgtctctg
gccctgctctcccctttcatgcccttcatcactgaggagctgtggcagagactccagcca
cgcggtcctggagccgctgcccccccgagcgctctatgtttacagccgtacccctgctcc
tctcagctggcacactggcatttccctgaagaggaaagagatttcctgttggtgcaggaa
gtgatccgagtggcccgctcactacgatcccagtgtcgcatgaccaaagaaaaacctgcc
atgtgggcagtgtgttcacccggccaggcccagattctgctgcactttggctcagctgtt
aggactttaagccggatctccagcctccatatccactgtcctcagagagcagacctcttc
tctgtccactccactcctccacccgaaggaagcctcatcggtgtggtggaccacacatgt
cagctacaccttcacattcagagtggaatgaacattgaaaaccagatggtgcagctctcc
cagcgcagagacaagctggttccaaagctggagaagatcctgggcagagtgcagtcccca
gactacctgaccaaggttcctgctcatgtcaggcagcagatggacactaagatgtcggcc
ctgcagcaggagctggagagtgtagaggagcagctgagggtcctgcaggagactcaaaca
tcaccataa
DBGET
integrated database retrieval system
