Sander lucioperca (pikeperch): 116035870
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Entry
116035870 CDS
T07345
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X2
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116035870 (exd1)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116035870 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
116035870
NCBI-ProteinID:
XP_031135083
Ensembl:
ENSSLUG00000004438
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Position
18:14115557..14120471
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AA seq
571 aa
AA seq
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MVVDDVQFLNTLKGKRVKLTLKTSSYLGVVQRINPNKTLILADVVGGSNGFKCPGSKMFF
GHEILNVEFTNQANTTIGNIHDHQFEEHLNVDKFQPYRKTITFGEDDDEEEYINFVVIDE
FHEKFASAVMHIKKQHVIGVGADGVEVFKHGRLCWLQIATKSKVYLFDILLLGARAFKNG
LSMILENKHILKVIHDCRAIAGCLIAQFGVKLTNVFDTQVADVMCFYSETGGLLPDRVST
LQEVVSLHLKVPSSQLLSLQMMSQLTKEELEMWCKRPCPVPLLKVMALSVIHLQPLRLVL
LDTVMTDYMALVDSYLNSSHYQPDELEHVSMESVLELPRELRQLDQMRRERQKRAADHYP
VTEEGLLARFNPRTQTPSQPSLVTEEHGQTQVESFEPANVESPSQVDPLLHKLPTSPPRV
NNVLSVDVHASPDPATTVSELMKQMAVTSPLSLGVGRGRTEVLMDTMGRGRPFRKEQSSI
PALPAIGRGFRLQISQDQIPRESMGDMITPGRMGAATSCPSHTLAQEVMSQPGPSVHDLT
KDTFGMAGEQFRSTPKSVPSSLMQSFMSFRY
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggacgacgttcagttcctgaataccctcaagggaaaacgcgtcaaacttacc
cttaagacttcatcttacctcggcgtcgtccaacgtatcaatcctaacaaaacactgatt
ttggccgacgttgttggtggcagtaatggcttcaaatgtcctggttcaaaaatgttcttc
gggcatgagattctgaatgtggagtttaccaatcaagcaaacactaccattggaaatatt
catgaccaccaatttgaagagcatttgaatgtggacaagtttcagccatacaggaagaca
atcacatttggtgaagatgatgatgaagaggagtacatcaactttgtagtcattgatgag
tttcatgagaagtttgcgtctgctgtgatgcatatcaagaagcagcatgtgatcggtgtg
ggcgctgatggagtcgaggtatttaagcatgggagactgtgttggctgcagattgccact
aaaagcaaggtatacctgtttgatattctcttacttggagctcgggcctttaagaacggt
ctttccatgatcctggaaaataaacacatactgaaggtcattcatgactgcagagccatt
gctggatgtctgattgctcagtttggagtaaagctaaccaacgtctttgatacgcaggtg
gcagatgtcatgtgcttctactccgagacaggaggtctccttcccgacagagtcagtact
ctgcaggaggtggtgagtctccatctgaaggtgccctcctcacagcttctgtcccttcag
atgatgtcacagctcaccaaggaagaactggagatgtggtgcaagcgtccctgtcctgta
cccctgcttaaggtgatggctttgtcagtgatccatcttcagcctctcagactggtgctg
ctggatactgtcatgacagactacatggccctggtggattcatacctcaacagcagccac
taccaacctgatgaattggagcatgttagcatggagagtgtgttggagctgcccagagag
ctcaggcagctggatcaaatgcgtcgtgagcggcagaagcgggctgcagaccactaccct
gtcacagaggaaggtctgctggcacgcttcaacccccgaactcagactccatcccagccc
tcgcttgtaacagaggagcacggccagacacaggtagaatcctttgaacctgcaaatgtg
gaatcaccttcacaagttgaccctctccttcacaagctgcccacgagccctccaagagtc
aacaatgttttgtctgtggatgtccatgcctcccctgacccagctaccactgtatcagag
ctcatgaaacaaatggctgttaccagtcccctgtcacttggtgtaggtagagggcgcaca
gaggtactgatggacacaatgggaagaggaaggccctttcggaaagagcagtcatccatc
ccggccttacctgccataggaagaggcttccgtctccaaatatcacaagatcagatcccc
agagagagtatgggggacatgataactcctggtaggatgggtgcggctacttcgtgcccc
agccatacacttgcccaagaagtgatgtcccagcctggccccagtgttcatgacctgaca
aaggacacttttggcatggcaggagaacaattcagatcaacgcccaagtccgtcccatct
tcactcatgcagtcattcatgtctttcagatactaa
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